| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3162 |
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| Symbol | |
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| ID | 8254280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3765401 |
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| End bp | 3766339 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936814 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_003093419 |
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| Protein GI | 255533047 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.630653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGTTA AGATTCCGAA TAATTTGCCA GCGATTGAGC TTTTAAAGAA GGAAAATATA
TTTGTTATGA GTGATCTGAG GGCAGATACT CAGGATATTC GCCCAATGCG TGTGCTTATC
CTTAACCTGA TGCCTCTTAA AATATCTGCT GAAACAGATT TTGTACGTTT ATTATCCAAC
AATCCTTTAC AGGTTGAAGT TGAATTTTTA AGACTCGATT CCCACACTTC TAAAAATATA
TCTGAAGAAC ATCTGGAAAT GTTTTATAAA GGTTTTGGCG AAATAAAGGG AAACTTTTAT
GATGGTTTGA TCATTACCGG CGCTCCTGTA GAAATGCTGG AGTTTGAGGA AGTAAGCTAT
TGGAATGAGA TCACTCAAAT CTTTGACTGG GCCAGAAAAC ACGTTACCTC AACGCTCTAT
ATTTGCTGGG CGGCCCAGGC TGCGCTCTAT CATTTTTATG GGGTAGAAAA AAAGCCATTA
AAGGAAAAAT TATCCGGGGT TTTCAAGCAT ACTGCCAATG AAAAGGGACA TTCCCTGTTG
AGAGGCTTTG ACGACGAGTT CTTTATTCCC CATAGCAGAC ATACCACAAT ATTGAAATCG
GATTTGACTG ATAAGGAAGA TCTTCGTATC CTGTCAGAAT CTTCGGATGC AGGGGTAGCC
ATTGTATTTT CCCGGGGCGG GCGTGAATTT TATCTTACTG GTCACTCAGA ATACGCTCCG
CTAACCCTTC ACGAGGAATA TGTAAGAGAC CGGAATAAAG GTCTTGATGT ACCTGTACCG
AAAAACTATT ACCGGGATAA TGATCCAGAG AATGCGCCAT TGGTATGTTG GACAAGCCAT
GCGAATTTAC TCTTCAATAA TTGGCTCAAT TACTTTGTTT ACCAGGAAAC ACCTTATAAT
CTGGAGGACG TGGGTAAATT GGGAGAGATT GTTCAATAA
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| Protein sequence | MPVKIPNNLP AIELLKKENI FVMSDLRADT QDIRPMRVLI LNLMPLKISA ETDFVRLLSN
NPLQVEVEFL RLDSHTSKNI SEEHLEMFYK GFGEIKGNFY DGLIITGAPV EMLEFEEVSY
WNEITQIFDW ARKHVTSTLY ICWAAQAALY HFYGVEKKPL KEKLSGVFKH TANEKGHSLL
RGFDDEFFIP HSRHTTILKS DLTDKEDLRI LSESSDAGVA IVFSRGGREF YLTGHSEYAP
LTLHEEYVRD RNKGLDVPVP KNYYRDNDPE NAPLVCWTSH ANLLFNNWLN YFVYQETPYN
LEDVGKLGEI VQ
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