Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3147 |
Symbol | |
ID | 8254265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3753952 |
End bp | 3754371 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936799 |
Product | Protein-tyrosine phosphatase, low molecular weight |
Protein accession | YP_003093404 |
Protein GI | 255533032 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | [TIGR02691] arsenate reductase (thioredoxin) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.942281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAG TACTCGTATT ATGTACCGGC AACAGTTGCC GCAGTCAGAT TGCAGAAGGA TATCTGAGGC ACTTCGCAGG TGATGCCGCC GAGATCTACA GCGCAGGAAT CGAAACACAT GGCGTAAACC CAAAGGCCAT CGAAATTATG AAAAGAGACG GTATTGATAT ATCCGGCCAT ACTTCCAACA ATGTGAATGA ATACACAGGA ATAGAGTTTG ACTATGTGAT CACCGTTTGT GACAATGCAA AAGAAAGCTG CCCTTACTTC CCAACCAATG CTGTTAAGCT GCACTACAAT TTTCCTGACC CGGCAAAAGC CAAAGGAAAC GACGAGGAAG TTATGGAACA GTTTAGGGAA GTTCGCGAAA TGATCCGAAA GTATGCCCAG AACTTTGTTA ACGAAAACCT GAAGAACTAA
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Protein sequence | MKRVLVLCTG NSCRSQIAEG YLRHFAGDAA EIYSAGIETH GVNPKAIEIM KRDGIDISGH TSNNVNEYTG IEFDYVITVC DNAKESCPYF PTNAVKLHYN FPDPAKAKGN DEEVMEQFRE VREMIRKYAQ NFVNENLKN
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