Gene Phep_3147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3147 
Symbol 
ID8254265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3753952 
End bp3754371 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content44% 
IMG OID644936799 
ProductProtein-tyrosine phosphatase, low molecular weight 
Protein accessionYP_003093404 
Protein GI255533032 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID[TIGR02691] arsenate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.942281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAG TACTCGTATT ATGTACCGGC AACAGTTGCC GCAGTCAGAT TGCAGAAGGA 
TATCTGAGGC ACTTCGCAGG TGATGCCGCC GAGATCTACA GCGCAGGAAT CGAAACACAT
GGCGTAAACC CAAAGGCCAT CGAAATTATG AAAAGAGACG GTATTGATAT ATCCGGCCAT
ACTTCCAACA ATGTGAATGA ATACACAGGA ATAGAGTTTG ACTATGTGAT CACCGTTTGT
GACAATGCAA AAGAAAGCTG CCCTTACTTC CCAACCAATG CTGTTAAGCT GCACTACAAT
TTTCCTGACC CGGCAAAAGC CAAAGGAAAC GACGAGGAAG TTATGGAACA GTTTAGGGAA
GTTCGCGAAA TGATCCGAAA GTATGCCCAG AACTTTGTTA ACGAAAACCT GAAGAACTAA
 
Protein sequence
MKRVLVLCTG NSCRSQIAEG YLRHFAGDAA EIYSAGIETH GVNPKAIEIM KRDGIDISGH 
TSNNVNEYTG IEFDYVITVC DNAKESCPYF PTNAVKLHYN FPDPAKAKGN DEEVMEQFRE
VREMIRKYAQ NFVNENLKN