| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3141 |
|---|
| Symbol | |
|---|
| ID | 8254259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3749557 |
|---|
| End bp | 3750384 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644936794 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003093399 |
|---|
| Protein GI | 255533027 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGAAG AAATCAACCA CCCTGTACAA GGAAGCAAAT ACGACAAGAT TTTTAGGGAA
AACATGCACA ATACCCTACC TGGTATAATT AAACATGTCC TTCATTTAAA CGTCAATACT
GTAGAAGAAC TTACCGATGA TGTACAATTT ACCAAAGAAA GAAAAACAGA TTTATTAAAG
AAGGTTAGGG ATAACAAAGG CAACAGATAT GTGCTGCATG TTGAATACCA AACGGATAAT
TATCCGGAAA TGGCTTTTCG TATGGCAGAG TATAGCATCA TGTTGCAAAG AAAACATAAG
TTGCCTGTTA AACAGTTCGT AATTTACATT GGCCCTGCCA AAGCAAATAT GGCCACTTCT
ATCACAACTA AGGATTTCCG ATTCCGCTAC AACTTAACAG AGCTCTCTGC TGTAAACTAT
AAACTGTTCT TAAAATCAGA TTTGGTTGAG GAGAAAATGC TGGCAATTTT AAGTAATTTA
GCATCAGAAA GCGCAGAAAG TGTATTGGCA CAGGTTGTTC AGGAAATAGA AACCCATGCT
TCTACATTAG AACAAGGGCG TTATTTTAGA CAGCTAAGGA TACTTTTGCA ATTACGTAAT
TTAAATAAAA AAGCAATTAA AGATATGGCA TTGGTAGGAA AAATATTTAA AGAAGAAAAA
GACATTTTAT ATCGTAGAGG CGAAATTAAA GGCGAGATTA AAGGTATTGA AAAAGGTCGT
TATGAAGAAG CATTGGAAAT TGCTCTTGAA CTTAAAAAAG AAGGATTAGC TACAGAATTT
ATTGCTAAAA TCACTAAGCT TTCAATTGAA GAAATCCAGG CACTATAG
|
|---|
| Protein sequence | MPEEINHPVQ GSKYDKIFRE NMHNTLPGII KHVLHLNVNT VEELTDDVQF TKERKTDLLK
KVRDNKGNRY VLHVEYQTDN YPEMAFRMAE YSIMLQRKHK LPVKQFVIYI GPAKANMATS
ITTKDFRFRY NLTELSAVNY KLFLKSDLVE EKMLAILSNL ASESAESVLA QVVQEIETHA
STLEQGRYFR QLRILLQLRN LNKKAIKDMA LVGKIFKEEK DILYRRGEIK GEIKGIEKGR
YEEALEIALE LKKEGLATEF IAKITKLSIE EIQAL
|
|---|
| |