| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3131 |
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| Symbol | |
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| ID | 8254249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3739074 |
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| End bp | 3739850 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936784 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003093389 |
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| Protein GI | 255533017 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.859893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGT ATGCCTTAAT CACAGGTGCA AGTAAAGGTA TTGGTAAATC CATGGCTATT
GAGCTGGCCA GGTCCGGATA TCAGCTCTTG TTGATCGCAC GTTCCGAAAC CGAACTGCGT
ATGCTCTCCA AATTGTTAAA AGAACAATTT CAGGTTAAAG TAAGTTATCT GGCTACCGAC
CTTTCTTTAA CAGATTCAAC CCAACTGGTG GCAGCCTGGT GCGCGCAGCA AACTGACCGG
TTGTCGATAC TGATCAACAA TGCAGGCTTT GGTTTATGGG GCGATTTCGG GAACCTGGAA
CTCCATGAAC AAATGGCTAT GCTGAAATTA AATATCGATG CTGTCATTAG CCTGACTTAT
CATTTACTTC CCGTATTAAA ACAACAGCAG CAAAGTTATA TTTTAAATAT TTCAAGTACT
GCAGCCTATC AGGCGGTACC TACCCTGGCT TTATATGCCG CCAGCAAATC ATTTGTCCTT
TCGTATAGCC GGGCATTAAG GTATGAGCTT AAAAAAACAA CAGTTTCGGT AAGTTGTCTT
TGTCCGGGCC CTACCGACAC CGGTTTTGCT AACCGCGCGG GCCTTGATGT CCTTGCAGAT
CTTGCCGAGA AATTTAACAT GCAACCAGCA GTTGTAGCAA AGGCAGGATT AAAGGGAATG
TTCAATAAGA AAGCTGAAAT TATTCCCGGC TTCCTGAACA AACTGTCAGC TTATGGTGCC
CAATATTTAC CCAAGGCCCT TATTGAGCGG ATTACAGCTG GTTTATACAA ACGATAG
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| Protein sequence | MEQYALITGA SKGIGKSMAI ELARSGYQLL LIARSETELR MLSKLLKEQF QVKVSYLATD
LSLTDSTQLV AAWCAQQTDR LSILINNAGF GLWGDFGNLE LHEQMAMLKL NIDAVISLTY
HLLPVLKQQQ QSYILNISST AAYQAVPTLA LYAASKSFVL SYSRALRYEL KKTTVSVSCL
CPGPTDTGFA NRAGLDVLAD LAEKFNMQPA VVAKAGLKGM FNKKAEIIPG FLNKLSAYGA
QYLPKALIER ITAGLYKR
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