Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3128 |
Symbol | |
ID | 8254246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3736174 |
End bp | 3736920 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644936781 |
Product | ABC transporter related |
Protein accession | YP_003093386 |
Protein GI | 255533014 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGCA AGATCCTGGA AATACACGAT GTAAAACGCG AGTTTATTAT GGGGACTGAA ACCGTCAGGG CTTTAAAAGG AGTTTCTTTT GATGTGGATT CGGGTGAGTT TTTAACCATC ATGGGCAGCA GCGGATCGGG CAAAACCACT TTATTAAATA TGCTGGGTTG CCTGGACAAG CCAACAGAAG GCACTTACCT GCTGGATGGG GTAAATGTGA AGGAACTGAG CAGAGATGAA CTGGCCAAAT TAAGGAACCA TAAGATTGGG TTTGTGTTTC AGGCCTATAA CTTACTGCCC CGCACCTCGG CCCTTGAAAA TGTGGAACTT CCGCTGTTGT ATAATCCTGA AATTGGGAAT AAAGAGCGCA AAGAAAGGGC AATTGCTGCA TTACAGGCTG TGAAACTGGA TGGTAGGTTT GACCATATGC CCAACCAGCT GTCGGGCGGG CAACAACAGC GTGTGGCCAT TGCCAGGGCC CTGGTCAATG AACCAGTGAT GATTCTTGCA GATGAGGCCA CAGGTAACCT GGATACCCGT ACATCCTACG AGATCATGTC ACTGATGCAG GAACTGAACC AGAATGGCAA GACCATTGTA TTTGTTACCC ATGAGCCAGA TATTGCTGCT TTCAGCAGCA GGACCGTAAT GCTAAAGGAC GGCAGGGTAC AAAAAGATTC CATCAATAAC AACACCAGAC TGGCAAAGGA TGCACTTGCA GCTCTCCCTC AAACAGACGA TTATTAA
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Protein sequence | MSGKILEIHD VKREFIMGTE TVRALKGVSF DVDSGEFLTI MGSSGSGKTT LLNMLGCLDK PTEGTYLLDG VNVKELSRDE LAKLRNHKIG FVFQAYNLLP RTSALENVEL PLLYNPEIGN KERKERAIAA LQAVKLDGRF DHMPNQLSGG QQQRVAIARA LVNEPVMILA DEATGNLDTR TSYEIMSLMQ ELNQNGKTIV FVTHEPDIAA FSSRTVMLKD GRVQKDSINN NTRLAKDALA ALPQTDDY
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