Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3127 |
Symbol | |
ID | 8254245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3734927 |
End bp | 3736177 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644936780 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003093385 |
Protein GI | 255533013 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCTA GAAAAACCAT TTTAATTATC GCATCAGTTA TCGTTGTACT CGGACTGATA TGGTATTTCT TTTTAAGGAC AAAAGAACAA CCGGTTGTAC TTAGTCAGGA AAAGCCGACT ATAGGGCCAA TTTCTTCGAG TGTAACGGCT ACCGGAACCG TGCAGCCCGT GGACACGGTT ATTGTAGGTA CCCAGGTTTC CGGAACCATT TCGGCACTGT ATGCCGACTT CAATTCTACA GTTAAAAAAG GACAGTTGCT GGCCCAGCTT GACAAAACAT TGATCCAGAC AACGGTTGAC CAGGCCAGGG CCAGTGTGGC ACAGGCACAA AGTAACCAGG CTTACCAGCA GGCAAATTTT AACAGGCAAA AACAACTGTT TGAAACGGGT TCGATCAGCC GGGCAGACTA CGACCAGGCA TTAAATAACC TTCAGGTAGC TACTGCAAGC GTAAACAATG CCAGGGCCCA GTTAAGATCT GCCGAAAGGA ACCTTTCTTT TACACAAATC TACTCGCCTA TAGATGGCGT GGTACTGGGC AGGAGTGTAA GTATTGGTCA AACTGTGGCA GCAAGTTTTA ATACGCCAAC CATTTTCTCC ATTGCTAAAG ACATCACTAA AATGCAGGTA CAGGCAAAAG TAGATGAGGC CGATATAGGG AACGTAGCCA AAGGACAACG TGCTACCTTT ACCGTTGATG CTTTTATTGA TGATACCTTT AACGGGACAG TGAAAGACAT CCGTTTACAA CCTTCTATAT CCTCAAACGT AGTGACCTAT GCTACCTTAA TTGATGCACC AAATGACAAC AAGAAATTAA AACCAGGGAT GACGGCAAAC ATCATCATTT ATACAAAAGA AGTGAATGAT GCCTTACTGA TCTCGGCCCA GGCCCTAAAG TTCAGGCCGG ATTCGGCTTC ATTGAAAAAT TATGAGATTA TTCCGCTCCC CCACAAAAAA AGAGGCGATA AAACGGGAAG CAACAAGCCC AGGAGAGATA AAACGGCAGG AAAAGCAAAT GGAGAAACAG TCATGACCGA ACCTTCATAT GTATGGGTAT TGGATGGACA GAAGCTTATC CAGAAAAAGA TAAAAACAGG TTTAAACGAC AATACCCATG TAGAAGTACT GGAGGGGCTT ACACAAAATG ATATTGTAAT TAACGGAATG GAGGGGGGTG TAACCGCAGC GCCGGCCGCA GCAGCCACCA GTCCTTTTAT GCCGCAAAGA AGAGGAGGAA GCAGACGATG A
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Protein sequence | MKSRKTILII ASVIVVLGLI WYFFLRTKEQ PVVLSQEKPT IGPISSSVTA TGTVQPVDTV IVGTQVSGTI SALYADFNST VKKGQLLAQL DKTLIQTTVD QARASVAQAQ SNQAYQQANF NRQKQLFETG SISRADYDQA LNNLQVATAS VNNARAQLRS AERNLSFTQI YSPIDGVVLG RSVSIGQTVA ASFNTPTIFS IAKDITKMQV QAKVDEADIG NVAKGQRATF TVDAFIDDTF NGTVKDIRLQ PSISSNVVTY ATLIDAPNDN KKLKPGMTAN IIIYTKEVND ALLISAQALK FRPDSASLKN YEIIPLPHKK RGDKTGSNKP RRDKTAGKAN GETVMTEPSY VWVLDGQKLI QKKIKTGLND NTHVEVLEGL TQNDIVINGM EGGVTAAPAA AATSPFMPQR RGGSRR
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