| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3069 |
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| Symbol | |
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| ID | 8254186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3667673 |
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| End bp | 3668503 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936722 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_003093328 |
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| Protein GI | 255532956 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.201112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00274028 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGA AGCAACTATT TGAGCAAATT AAAACCAAGA AATCTTTTTT GTGTGTTGGC
CTTGATCCTG TAATGGAACA AATTCCAAGA CACCTGCTAA AATATGACAA TCCGGTACTG
GAATTTAATA AACAGCTCAT CGATGCGACA AAAGATCTGT GTGTTGCCTA TAAGCCCAAT
ACTGCTTTTT TTGAATCGAT GGGGCTGAAG GGTTGGGAAA CGCTGATCAG GACCTGGGAA
TATATTCCTA AAGATATCTT TACTATTGCA GATGCAAAAA GAGGTGATAT TGGCAATACG
TCGGCCATGT ATGCCGATGC ATTTTTTAAC AAGGAGAAAT CGGGGATGGG TTTTGATGCC
ATTACTGTGG CGCCCTATAT GGGCAAAGAT TCTGTTGGAC CATTTTTAAA CCATAAGGAT
AAATGGGTGA TCCTCCTGGC TTTAACCTCA AATATTGGGC ATAGTGATTT TCAGTTGCAC
CAAACGCCTG AAGGAAAGCT GTATGAAGAG GTGATCCGCA TTTCTTCAGC ATGGGCAGAC
AGTGAGCAGC TGATGTATGT AGTAGGTGCT ACCCGTGGGG CAGAGTTTAA AAATATCAGG
AGGCTTGCGC CAGATAATTT TTTACTGGTA CCTGGTGTTG GTGCACAGGG AGGAAGCCTT
GCCGATGTTT GTACCTACGG GTTAAATGAC AGCTGTGGTT TACTGGTAAA TTCGGCCAGG
TCGATTATCT ATGCAGGGAA TGGGGAGGAT TTTGCTGAAA AGGCAAGAGC AGAAGCATTG
AAACTGCAGC AGGAGATGGA ACAAATATTA TTAGCTGCCG GTTTAATTTA A
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| Protein sequence | MNKKQLFEQI KTKKSFLCVG LDPVMEQIPR HLLKYDNPVL EFNKQLIDAT KDLCVAYKPN
TAFFESMGLK GWETLIRTWE YIPKDIFTIA DAKRGDIGNT SAMYADAFFN KEKSGMGFDA
ITVAPYMGKD SVGPFLNHKD KWVILLALTS NIGHSDFQLH QTPEGKLYEE VIRISSAWAD
SEQLMYVVGA TRGAEFKNIR RLAPDNFLLV PGVGAQGGSL ADVCTYGLND SCGLLVNSAR
SIIYAGNGED FAEKARAEAL KLQQEMEQIL LAAGLI
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