| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3060 |
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| Symbol | |
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| ID | 8254176 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3657248 |
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| End bp | 3657948 |
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| Gene Length | 701 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 38% |
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| IMG OID | 645945543 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000685673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCAGCCTA TTAAATGTTT AATTGTTGAT GATGAGCCCA TTGCCAGGAA TCTGCTGATA
GATTATTGTA GCTATTTAAG TGTGCTTGAG GTTGTTGAGG TATGTGAAAA TGCTTTCGAG
GCACGTGAAT GTTTAATGAA CCGAAAAATT GACCTTATTT TCCTTGACAT CAATATGCCT
TTGCTAGATG GGATCGGTTT CTTAAAAACC ATTAAAAATG TGCCACGGGT TATTTTTACT
ACAGCATACC GGAAGTTTGC CGTAGCAGCT TTCGATCTCG CGGCCTGCGA CTATCTTGTT
AAACCATTTT CGTTAGACCG GTTTATTCAG GCGGTTGATA GAGTAAAAAT GGATTGACGC
CCGAAAAGCA AGAAATGTCT AACGATATTG GGTATATTTT GGTTAGAGCA GAAGGCATAA
CCTATCAAGT GAAATTGGAA GAAATAATTT TTGCTGAAGC TAAGAAGAAC TATACCCATC
TATTCGGAGA TTCCAGGGTA CTTAAACCAA AGCTTGCCCT GTCGGAAGTT GAAAAGTTAC
TTCCGCCGGC ACAATTTATT CGTGTGCACC GCTCTTTCAT TATTAATAAA GAGAAAATTA
AACATATCGA TGGTAATAGC ATTTATGTTG ATAAACATGT AATCCCGCTG GGTGGGAGTT
TTAGGGAAGG TTTTTTAAAA AAAATTGGGG CAATAGATTA A
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| Protein sequence | |
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