Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3060 |
Symbol | |
ID | 8254176 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3657248 |
End bp | 3657948 |
Gene Length | 701 bp |
Protein Length | |
Translation table | |
GC content | 38% |
IMG OID | 645945543 |
Product | |
Protein accession | |
Protein GI | |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000685673 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAGCCTA TTAAATGTTT AATTGTTGAT GATGAGCCCA TTGCCAGGAA TCTGCTGATA GATTATTGTA GCTATTTAAG TGTGCTTGAG GTTGTTGAGG TATGTGAAAA TGCTTTCGAG GCACGTGAAT GTTTAATGAA CCGAAAAATT GACCTTATTT TCCTTGACAT CAATATGCCT TTGCTAGATG GGATCGGTTT CTTAAAAACC ATTAAAAATG TGCCACGGGT TATTTTTACT ACAGCATACC GGAAGTTTGC CGTAGCAGCT TTCGATCTCG CGGCCTGCGA CTATCTTGTT AAACCATTTT CGTTAGACCG GTTTATTCAG GCGGTTGATA GAGTAAAAAT GGATTGACGC CCGAAAAGCA AGAAATGTCT AACGATATTG GGTATATTTT GGTTAGAGCA GAAGGCATAA CCTATCAAGT GAAATTGGAA GAAATAATTT TTGCTGAAGC TAAGAAGAAC TATACCCATC TATTCGGAGA TTCCAGGGTA CTTAAACCAA AGCTTGCCCT GTCGGAAGTT GAAAAGTTAC TTCCGCCGGC ACAATTTATT CGTGTGCACC GCTCTTTCAT TATTAATAAA GAGAAAATTA AACATATCGA TGGTAATAGC ATTTATGTTG ATAAACATGT AATCCCGCTG GGTGGGAGTT TTAGGGAAGG TTTTTTAAAA AAAATTGGGG CAATAGATTA A
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Protein sequence | |
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