Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3056 |
Symbol | |
ID | 8254172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3653154 |
End bp | 3653552 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936709 |
Product | hypothetical protein |
Protein accession | YP_003093316 |
Protein GI | 255532944 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.619064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000491521 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAAAGGA CACTGCTTAC CATACTTGCC ATTTTTTACC TGGGTGTATC CAGCGGAGCA AGTGTGCACT TTCATTATTG TATGGGAGAA CTGGTAAGCT GGGGACTGGA AAAACAATCC CGCAAGGTTT GCGATTTTTG TGGAATGCCA AAATCGGCAG CTAAAAAGAA ATCCTGCTGC AAAGATGTTG AACAACAGGT TAAGGTTGAA AAATCCCAAA AAGTAAGCCA GACCGTTTAT AAATTTGATC AGCTTTCAAC AGCAGTCACC CTGCCTGAAT TGTTTGCTGT TCAACAGGCG CCCGTACCTG TAAAAATTAC CAGGGAAGCA TTAAGCAATG CTCCGCCTGA GGGAGAGCGT ATCCCTGTTT ACCTAAAAAA CTGTACCTAC AGAATATAA
|
Protein sequence | MKRTLLTILA IFYLGVSSGA SVHFHYCMGE LVSWGLEKQS RKVCDFCGMP KSAAKKKSCC KDVEQQVKVE KSQKVSQTVY KFDQLSTAVT LPELFAVQQA PVPVKITREA LSNAPPEGER IPVYLKNCTY RI
|
| |