Gene Phep_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3056 
Symbol 
ID8254172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3653154 
End bp3653552 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content43% 
IMG OID644936709 
Producthypothetical protein 
Protein accessionYP_003093316 
Protein GI255532944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.619064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000491521 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAGGA CACTGCTTAC CATACTTGCC ATTTTTTACC TGGGTGTATC CAGCGGAGCA 
AGTGTGCACT TTCATTATTG TATGGGAGAA CTGGTAAGCT GGGGACTGGA AAAACAATCC
CGCAAGGTTT GCGATTTTTG TGGAATGCCA AAATCGGCAG CTAAAAAGAA ATCCTGCTGC
AAAGATGTTG AACAACAGGT TAAGGTTGAA AAATCCCAAA AAGTAAGCCA GACCGTTTAT
AAATTTGATC AGCTTTCAAC AGCAGTCACC CTGCCTGAAT TGTTTGCTGT TCAACAGGCG
CCCGTACCTG TAAAAATTAC CAGGGAAGCA TTAAGCAATG CTCCGCCTGA GGGAGAGCGT
ATCCCTGTTT ACCTAAAAAA CTGTACCTAC AGAATATAA
 
Protein sequence
MKRTLLTILA IFYLGVSSGA SVHFHYCMGE LVSWGLEKQS RKVCDFCGMP KSAAKKKSCC 
KDVEQQVKVE KSQKVSQTVY KFDQLSTAVT LPELFAVQQA PVPVKITREA LSNAPPEGER
IPVYLKNCTY RI