| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3027 |
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| Symbol | |
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| ID | 8254139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3619208 |
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| End bp | 3620026 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936676 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003093287 |
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| Protein GI | 255532915 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00333155 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTTTT TTAAAAATAA AGTAGTTATA ATTACCGGCG CGTCTTCAGG TATTGGAAAA
GCTTGCGCCG AAGAATTTGC AAAACGGGGG GCAAACCTGG TACTGGCTGC AAGACAATAT
GTAACCCTTT GTGAAATTAC AGCTGATCTT GAAAGGAGAT ACAGCATAAA AGCTATAGCT
GTGCAGGTTG ATGTGAGTAA AGAAGAAGAT TGCATACTGA TGGTTAAACA GGCTTTGGTT
ACTTTCAATA AAATTGATAT GCTCATCAAT AACGCAGGTC TTTCTATGCG GGCATTGTTT
AATGAAGTAG AGCTTGCAGT GTTAAAAAAC CTGATGGATG TAAACTTCTG GGGTGCTGTA
TATTGCACAA AATATGCTTT GCCTGAAATA CTTAAAACCA AGGGCAGCAT TATTGGCGTG
TCCTCTATAG CGGGTTATCG TGGCTTGCCG GGCCGCACCG GATATTCTTC TTCTAAATTT
GCAATGAATG GATTTATGGA GTCCTTACGT ACCGAACTGC TCAAAACAGG AGTGCACGTA
ATGGTGGCCT GCCCGGGTTT TACCACTTCC AATATCCGTG TAGCAGCTTT GGCAAAAGAC
GGGACTTCCC ACGGTGAAAC CAGTATGGAA GAAGGGAAAA TGATGAGTGC AGAAGAAGTT
GCCGTAAATA TTGCTAATGG AATTGCTGCA CGTAAACGCA CGCTGATAAT GACAGGGCAG
GGCAAGCTTA CGGTCTGGAT CAATAAATTG CTGCCTGCAC TTGCAGATAA ACTGGTGTTT
AATCATTTTA CCAAAGAAAA GAATGCCTTA GTTAAATAA
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| Protein sequence | MDFFKNKVVI ITGASSGIGK ACAEEFAKRG ANLVLAARQY VTLCEITADL ERRYSIKAIA
VQVDVSKEED CILMVKQALV TFNKIDMLIN NAGLSMRALF NEVELAVLKN LMDVNFWGAV
YCTKYALPEI LKTKGSIIGV SSIAGYRGLP GRTGYSSSKF AMNGFMESLR TELLKTGVHV
MVACPGFTTS NIRVAALAKD GTSHGETSME EGKMMSAEEV AVNIANGIAA RKRTLIMTGQ
GKLTVWINKL LPALADKLVF NHFTKEKNAL VK
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