Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3019 |
Symbol | asnC |
ID | 8254131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3610277 |
End bp | 3611725 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644936668 |
Product | asparaginyl-tRNA synthetase |
Protein accession | YP_003093279 |
Protein GI | 255532907 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.852561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00877585 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATACACA GAGAAAAAGT AAAGAGTCTG CTCGAGACAG AAGAGTTTAA CAGAGAAGTA ACAGTTATGG GTTGGGTACG TACCTTCCGT AACAATCAGT TTATAGCTAT AAATGATGGC TCCTGCATGG GAAACATCCA GGTTGTTGTT GATTTTAATC ATACGGATGA AGCCTTATTG AAACGCATTA CTACTGGTGC AGCAATTGCT GTAAATGGTA TTATTGTGGA ATCCGTTGGA AAAGGACAAA GAGTTGATAT AAAAGCAACC TCCATAGAAA TACTAGGTGA TAGTGATCCG GAGAAATTCC CTTTACAACC TAAAAAACAT AGCTTAGAGT TTTTAAGGGA AATCGCACAC CTGCGTTTTC GTACCAATAC TTTTAATGCG ATATTTAAGG TACGCCATGC ACTGGCCTTT GCAATACACC AGTTTTACAA TGAAAGAGGC TTTGTGTATA TGCACACACC AATTATTACA GCTTCAGATG CTGAAGGTGC CGGAGAAATG TTCAGAGTAA CGACACTTGA CCTGGAAAAC CCGCCACGCA CTGAAGATGG TAAGGTAGAT TTTTCTGAGG ATTTCTTTGC CCGCTCTACA AACCTAACAG TTTCAGGTCA GCTGGAAGGC GAGCTTGCGG CTATGGCATT TGGACAGATT TATACTTTCG GACCAACCTT TAGGGCTGAA AACTCAAATA CAACACGCCA TCTGGCTGAA TTCTGGATGG TAGAGCCTGA GGTTGCTTTT GCCGACCTGG AAGACAACAT GCAGCTGGCA GAGGACATGC TCAAATACGT GATCCGTTAT GCTTTGGACA ACTGCGCAAC AGAAATTGAT TTCTTAAACA ACAGGTTACT GGAAGAAGAG AAATCAAAAC CACAAAATGA GCGCAGTGAA ATGTCGCTGA TTGAAAAATT AAATTTCTGT CTGGATAATG ATTTTGAAAG GTTAACGTAT ACCGAAGCCA TTAAAATTTT AAAATCGTCG AAACCAAATC AGAAAAAACA GTTCAAATAC CTGATTGATG AATGGGGTGC TGACCTGCAA TCGGAACACG AGCGCTACCT GGTTGAAAAA CATTTTAAGA AACCGGTAAT CCTGACAGAT TACCCTGCCG ATATTAAATC ATTTTACATG AGACAAAATG AACCCGATGA AGTGGGAAGA AAAACGGTAG CCGCAATGGA TATCCTTTTC CCTGGAATAG GAGAAATGGT TGGAGGTTCA CAAAGGGAAG AACGTATGGA TAAATTGGTT GCCAGAATGG AAGAACTAAA TATTCCACAG GAAGAACTTT GGTGGTTTTT AGACACCAGA CGTTTCGGTT CGGCACCGCA CTCTGGTTTT GGCCTTGGCT TTGAAAGACT TGTTCTTTTT GTAAGTGGCA TGACCAACAT CAGGGATGTT ATTGCATTTC CCCGTTTCCC TAAGAATGCA GAATTTTAA
|
Protein sequence | MIHREKVKSL LETEEFNREV TVMGWVRTFR NNQFIAINDG SCMGNIQVVV DFNHTDEALL KRITTGAAIA VNGIIVESVG KGQRVDIKAT SIEILGDSDP EKFPLQPKKH SLEFLREIAH LRFRTNTFNA IFKVRHALAF AIHQFYNERG FVYMHTPIIT ASDAEGAGEM FRVTTLDLEN PPRTEDGKVD FSEDFFARST NLTVSGQLEG ELAAMAFGQI YTFGPTFRAE NSNTTRHLAE FWMVEPEVAF ADLEDNMQLA EDMLKYVIRY ALDNCATEID FLNNRLLEEE KSKPQNERSE MSLIEKLNFC LDNDFERLTY TEAIKILKSS KPNQKKQFKY LIDEWGADLQ SEHERYLVEK HFKKPVILTD YPADIKSFYM RQNEPDEVGR KTVAAMDILF PGIGEMVGGS QREERMDKLV ARMEELNIPQ EELWWFLDTR RFGSAPHSGF GLGFERLVLF VSGMTNIRDV IAFPRFPKNA EF
|
| |