| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3001 |
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| Symbol | |
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| ID | 8254113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3593364 |
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| End bp | 3594752 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936650 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_003093261 |
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| Protein GI | 255532889 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0472874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.642083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTACG ATTTAATTGT AATAGGCAGC GGTCCGGGTG GATACGTAGC TGCGATCAGA
GCTTCTCAGT TAGGTTTGAA AACTGCGGTA GTTGAGCGCG AATCTTTAGG TGGAATATGC
CTGAACTGGG GCTGTATACC AACCAAAGCA TTGTTAAAAA GCGCTCAGGT ATTTGAATAC
ATCAATCATG CTGCAGAGTA TGGAATTAAA ACTGCTGAAG CCGAAGCAGA CTTTGCTGCT
GTGATTAAAC GCAGTCGGGG TGTTGCAGAT GGCATGAGTA AGGGTGTTCA GTTCCTGATG
AAAAAGAACA AGATTGATGT GATCATGGGC ACTGGCAAAG TTAAGCCAGG CAACAAGGTA
GAAGTTAAAG CTGCTGACGG ATCACAAAAA GAATATACAG CAACAAGTAT TATACTGGCT
ACCGGTGGAA GATCAAGAGA ATTGCCGAAC CTGAAACAGG ATGGCAAAAA AGTGATTGGA
TACCGACAGG CAATGGTATT GCCTGAGCAG CCAAAATCGA TGGTTGTGGT GGGGTCTGGT
GCTATTGGTG TAGAATTTGC TTATTTTTAT GCTACTTTAG GCACTAAGGT TACTGTTGTA
GAATTTATGG ACAATGTAGT ACCTGTTGAA GATGAGGATG TATCTAAACA GTTGCTGCGC
AGCTTCAAAA AAGCAGGAAT TGAAGTGATG ACCTCTTCAA GCGTTGAATC TGTAGACACC
AGTGGTAGCG GCTGCAAGGT TCAGGTTAAA ACTGCTTCAG GTATGCAAAC TTTAGAATGC
GATATCGTCC TTTCTGCAGC AGGTGTGGTA GCAAACATTG AAAATATTGG CCTGGAAGAA
ACAGGCATAA AAACCGAAAA AGGTAAGGTA GTTGTAGATG AGTTTTACAA TACTTCTGTA
AAAGGTGTTT ATGCAATTGG TGATATTGTT GGCGGACAGG CGCTGGCACA CGTTGCTTCG
GCAGAAGGCA TTATCTGTGT AGAAAAAATT GCTGGTCATA AACCAGAGCC TTTGGATTAT
AACAACATCC CTGGATGTAC TTATTGCAGT CCTGAGATTG CTTCTGTAGG TTATACGGAA
AAAGCAGCTA AAGCGGCAGG ATATGAATTG AAGATCGGTA AATTCCCATT CTCTGCTTCT
GGTAAAGCCA GTGCTGCAGG TGCCAAGGAT GGTTTTGTAA AACTAATCTT TGATGCAAAA
TATGGCGAAT TATTAGGCGC ACACATGATT GGCGCCAATG TAACTGAAAT GATTGCCGAG
ATTGTGGTTG CGCGTAAGCT CGAAACAACA GGCCACGAAA TGATTAAATC GGTACATCCA
CATCCAACCA TGAGCGAAGC AATTATGGAA GCTGCAGCTG ATGCGTATGG AGAGGTAATT
CATTTGTAA
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| Protein sequence | MNYDLIVIGS GPGGYVAAIR ASQLGLKTAV VERESLGGIC LNWGCIPTKA LLKSAQVFEY
INHAAEYGIK TAEAEADFAA VIKRSRGVAD GMSKGVQFLM KKNKIDVIMG TGKVKPGNKV
EVKAADGSQK EYTATSIILA TGGRSRELPN LKQDGKKVIG YRQAMVLPEQ PKSMVVVGSG
AIGVEFAYFY ATLGTKVTVV EFMDNVVPVE DEDVSKQLLR SFKKAGIEVM TSSSVESVDT
SGSGCKVQVK TASGMQTLEC DIVLSAAGVV ANIENIGLEE TGIKTEKGKV VVDEFYNTSV
KGVYAIGDIV GGQALAHVAS AEGIICVEKI AGHKPEPLDY NNIPGCTYCS PEIASVGYTE
KAAKAAGYEL KIGKFPFSAS GKASAAGAKD GFVKLIFDAK YGELLGAHMI GANVTEMIAE
IVVARKLETT GHEMIKSVHP HPTMSEAIME AAADAYGEVI HL
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