Gene Phep_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2973 
Symbol 
ID8254085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3546145 
End bp3549813 
Gene Length3669 bp 
Protein Length1222 aa 
Translation table11 
GC content47% 
IMG OID644936622 
Productphosphoribosylformylglycinamidine synthase 
Protein accessionYP_003093233 
Protein GI255532861 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATT TCTTCTCAAG CCAATCCAAA ACGGTTTTCG CCTTACAAAT AGAACGAAAC 
CTGAGCACTA CAGATATTAC AAAACTAGAA TGGCTGTTTG GCGGCGCAAA ACTACAACAG
GAAACTACAT TAAATGACTT TTTTGTTGGG CCTCGCGCAG CAATGGTTAC CCCCTGGAGT
ACCAATGCAG TAGAAATTAC CCAGAATATG GACATCCATG GAATTATCCG TATCGAGGAA
TTTCAGCAGG TAGAAGAGAA TTTTTCTGAT TATGACCCCA TGCTGTCCCA GAAATACAGC
AAACTGGACC AGGACATTTA TACCATTCAC ATTAAACCCG AGCCTATCCT GCAAATCAGC
GATATTGCTG CTTACAACAA GCAGGAAGGA CTTTCCTTAA GTGATGAAGA GATAGCTTAT
TTAAACGAAC TCTCGGGCCG ACTGGGCAGG GAACTTACCG ATTCAGAAGT ATTTGGCTTC
TCGCAGGTCA ACTCAGAACA TTGCCGCCAT AAAATTTTTA ACGGCAAATT TGTAATCGAT
GGGATTGAAC AGCCCATTTC ACTTTTTAAA CTGATCCGCA AAACTTCAGA AGAAAACCCC
AATGATATTG TATCGGCCTA TAAAGACAAT GTAGCCTTTA TTAAAGGCCC TAAGGTGCAG
CAGTTTGCAC CTAAACGCGC CGATGAACCA GATTATTATA CACTAAGCGA TTTTGAATCG
GTAATTTCCG TAAAAGCTGA GACCCATAAC TTCCCCACTA CTGTTGAACC TTTTAATGGT
GCCGCTACCG GATCGGGTGG CGAGATCAGG GACAGGCTGG CAGGTGGACA GGGCTCTTTG
CCCCTTGCCG GTACCGCAGT TTACATGACG GCCTTATCCA GACTGGAAGA AAACCGCCCC
TGGGAAAAGG GCGTGGAAGA AAGGCAATGG CTGTACCAGA CACCAATGGA TATCCTGATC
AAGGCTTCTA ACGGGGCTAC CGATTTTGGG AATAAATTTG GCCAGCCGCT CATTACCGGC
TCGGTACTTA CTTTTGAACA TGAAGAAAAT AACCGCAAGC TAGGTTTCGA CAAAGTGATT
ATGCTTGCCG GTGGCGTAGG CTATGGCAAG GCCAGTCAGG CACAGAAACA CAAGCCTGCT
GAAGGTGATA AAATTGTGAT CCTTGGCGGA GAAAATTACA GGATCGGGAT GGGCGGTGCG
GCTGTATCCT CGGCTGATAC CGGCGCACTG GGTACAGGAA TTGAATTAAA TGCCGTTCAG
CGTTCAAACC CTGAAATGCA GAAAAGAGCT GCCAATGCCG TACGCGGTAT GGTAGAAAGC
GATCAGAACA ACATTATATC TATACATGAC CATGGTGCGG GTGGCCACTT AAACTGCTTA
TCTGAACTGG TTGAAGAAAC AGGCGGAAAG ATAGACCTGG ATAAACTGCC TGTGGGCGAC
CCTACCCTTT CGGCCAAAGA GATCATCGGC AACGAATCTC AGGAACGTAT GGGCCTGGTT
ATCGGACAGG AGCACATCAA TACTTTGCAA AAAATTGCCG ACCGTGAGCG TTCGCCGATG
TATACCGTAG GTACGGTTAC CGGCGATCAT CGTTTTACTT TTGAATCGGC CTCTACCGGT
GTAAAACCGA TGGACCTGGA GCTGAAGGAT ATGTTTGGCA GCTCGCCAAA GGTGGTGATG
GAAGATAAAA CGATAGACAG GAAATACCTG CCTGTTACTT ATGACGCTGC ACAGCTAAAT
ACCTATTTGG AACAGGTATT GCAACTGGAA GCAGTGGCCT GCAAAGACTG GCTGACCAAT
AAGGTAGACC GTTGTGTGGG TGGCCGTGTA GCCAAACAGC AATGTGCCGG CCCACTGCAA
TTGCCGCTGA ACAACTGCGG GGTAATGGCT TTGGATTTTC AGGGAAAAGA AGGTATTGCA
ACATCTGTAG GACATGCCCC TTTGTCTGCG TTGATCGATG CAGGTGCAGG AAGCCGTATC
GCCATTGCAG AATCTCTTTC AAATATTGTA TGGGCACCTT TAAAGGACGG GTTGAAAAGT
GTTTCGCTTT CGGCCAACTG GATGTGGGCC TGTAAAAATG AAGGTGAAGA CGCCAGGTTA
TACGAAGCGG TAAAAGCCTG CTCTGATTTT GCCATCAGCC TGGGTATCAA TATCCCTACG
GGTAAAGATT CCCTGTCTAT GAAGCAGAAG TATAAAGACG GTGACGTTAT TGCCCCAGGA
ACGGTGATCA TTTCGGCAGC GGGTAACTGT AACGACATTA CCCGGGTGGT AGAACCTGTA
CTGCAAAAAA ATGGCGGTGC CATTTATTAC ATCAACCTTT CCAATGATAC CTATAAACTG
GGCGGATCGT CATTTGCGCA GATCCTGAAC AGGATTGGCA ATGAAACACC TGATGTGAAA
GACGCAGCAA CCTTTAAAAA GACATTTGAT ATCCTTCAGC AACTGATAAA GGAAGGTAAA
ATACAGGCCG GCCACGATAT AGGCAGTGGT GGTTTGATCA CTACTTTACT GGAAATGTGC
TTTGCCGATC GCGACCTGGG GGCCAGCCTC GATCTTTCGG CCCTGGGTGA GCAGGACATC
ATAAAACTGC TTTTTGCAGA AAATATTGGT ATAGTGTTCC AGGCTGATGC CACTGTTGAA
GCCAGCTTTG CCGCAAATGG CATTGCCTTG CATAAAATTG GCGAGCTGAG CACTGCAGCA
ACGCTGACCA TTAAAAATGG TTCGGCTGAA AGCTTAAACT TTGATGTTGA CCAGCTGCGT
GACGTATGGT TCAAAACCTC TTACCTGCTG GATAAAAAAC AAAGCGGGCC GGTTAAAGCT
AAAGAGCGTT TTGACAATTA CAAACACCAG GTATTGAAAT ATAATTTCCC TGCGCATTTT
GACGGCAAAA AACCGGTTAT TGATGCTTCA AAACCAAGGC CAAAAGCAGC CATTATCCGC
GAAAAGGGAA GTAACTCCGA GCGTGAACTG GCGAATGCCA TGTACCTTGC CGGTTTTGAT
GTAAAGGATG TGCACATGAC CGACCTGATT ACAGGCCGCG AAACACTGGA AGACATTCAG
TTTATTGGTG CCGTTGGCGG TTTCTCTAAC TCTGACGTTT TAGGATCAGC CAAAGGCTGG
GCTGGTGCTT TTATGTATAA TGAAAAAGCC AGGGTGGCGC TCGAAAATTT CTTTAACCGT
CCGGATACCC TATCTGTAGG TGTTTGTAAC GGTTGTCAGC TCTTTGTAGA ACTGGGCCTG
ATCAATAAAG ACCATGCTGA AAAGCCAAAA ATGCTACACA ATGAAAGCCA TAAACACGAA
AGTATATTTA CATCGCTAAC AGTGGCCGAG AACAATTCGG TTATGCTGTC TACCCTTGCG
GGAAGCACGC TGGGGGTTTG GGTTTCACAT GGTGAAGGAC GTTTCCAGTT GCCTTATGCA
GAAGATAAAT ACCGCATTGT AGCTAAATAT GCTTATGAAA GCTACCCCGC CAGCCCGAAT
GGTTCAGATT ACAACACAGC TATGCTGTGT GATGAGACGG GCCGCCACCT GGTAATGATG
CCACATATTG AGCGTTCCTT ATTCCAGTGG CACTGGGCAA ATTATCCTCA GGGCCGTAAA
GACGAGGTAT CACCATGGAT GGAAGCTTTT GTGAATGCCA GGAAATGGAT TGAAGGCCTT
AGGCCCTGA
 
Protein sequence
MIYFFSSQSK TVFALQIERN LSTTDITKLE WLFGGAKLQQ ETTLNDFFVG PRAAMVTPWS 
TNAVEITQNM DIHGIIRIEE FQQVEENFSD YDPMLSQKYS KLDQDIYTIH IKPEPILQIS
DIAAYNKQEG LSLSDEEIAY LNELSGRLGR ELTDSEVFGF SQVNSEHCRH KIFNGKFVID
GIEQPISLFK LIRKTSEENP NDIVSAYKDN VAFIKGPKVQ QFAPKRADEP DYYTLSDFES
VISVKAETHN FPTTVEPFNG AATGSGGEIR DRLAGGQGSL PLAGTAVYMT ALSRLEENRP
WEKGVEERQW LYQTPMDILI KASNGATDFG NKFGQPLITG SVLTFEHEEN NRKLGFDKVI
MLAGGVGYGK ASQAQKHKPA EGDKIVILGG ENYRIGMGGA AVSSADTGAL GTGIELNAVQ
RSNPEMQKRA ANAVRGMVES DQNNIISIHD HGAGGHLNCL SELVEETGGK IDLDKLPVGD
PTLSAKEIIG NESQERMGLV IGQEHINTLQ KIADRERSPM YTVGTVTGDH RFTFESASTG
VKPMDLELKD MFGSSPKVVM EDKTIDRKYL PVTYDAAQLN TYLEQVLQLE AVACKDWLTN
KVDRCVGGRV AKQQCAGPLQ LPLNNCGVMA LDFQGKEGIA TSVGHAPLSA LIDAGAGSRI
AIAESLSNIV WAPLKDGLKS VSLSANWMWA CKNEGEDARL YEAVKACSDF AISLGINIPT
GKDSLSMKQK YKDGDVIAPG TVIISAAGNC NDITRVVEPV LQKNGGAIYY INLSNDTYKL
GGSSFAQILN RIGNETPDVK DAATFKKTFD ILQQLIKEGK IQAGHDIGSG GLITTLLEMC
FADRDLGASL DLSALGEQDI IKLLFAENIG IVFQADATVE ASFAANGIAL HKIGELSTAA
TLTIKNGSAE SLNFDVDQLR DVWFKTSYLL DKKQSGPVKA KERFDNYKHQ VLKYNFPAHF
DGKKPVIDAS KPRPKAAIIR EKGSNSEREL ANAMYLAGFD VKDVHMTDLI TGRETLEDIQ
FIGAVGGFSN SDVLGSAKGW AGAFMYNEKA RVALENFFNR PDTLSVGVCN GCQLFVELGL
INKDHAEKPK MLHNESHKHE SIFTSLTVAE NNSVMLSTLA GSTLGVWVSH GEGRFQLPYA
EDKYRIVAKY AYESYPASPN GSDYNTAMLC DETGRHLVMM PHIERSLFQW HWANYPQGRK
DEVSPWMEAF VNARKWIEGL RP