Gene Phep_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2969 
Symbol 
ID8254081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3542889 
End bp3543362 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content41% 
IMG OID644936618 
ProductRibonuclease H 
Protein accessionYP_003093229 
Protein GI255532857 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAA TTTATACAGA CGGAGCGGCC AGCGGAAATC CCGGACCAGG TGGATACGGT 
GTGATTTTAC GCTCAGGTAA CCACTATAAG GAACTGAGTG CAGGCTTCCG TTTAACCACC
AATAACAGAA TGGAACTGAT GGCTGTTATT GTAGGTTTAA ATGCATTAAA AACACCCGGA
CAAGAAGTAA CTGTATTTTC TGATTCTAAA TATGTAATCG ATTCTGTAGA AAAAAAATGG
GTATTTGGCT GGGTAAAAAC AGGCTTTAAA GGAAAAAAGA ACAAAGACCT CTGGATGCAG
TTCTTAAATA GCTATAAACT GCACCACGTT AAATTTGTAT GGATAAAAGG GCATAACAAC
CACCCTGAAA ATGAAAGATG TGACCAGCTG GCCGTTGCAG CCTCAAAAAA CAGGGCAGCA
TTGGCTATCG ACGGCCCATT TGAAGCAGAA AAAAACAGTG CATCATTGCT TTAA
 
Protein sequence
MIEIYTDGAA SGNPGPGGYG VILRSGNHYK ELSAGFRLTT NNRMELMAVI VGLNALKTPG 
QEVTVFSDSK YVIDSVEKKW VFGWVKTGFK GKKNKDLWMQ FLNSYKLHHV KFVWIKGHNN
HPENERCDQL AVAASKNRAA LAIDGPFEAE KNSASLL