Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2969 |
Symbol | |
ID | 8254081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3542889 |
End bp | 3543362 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644936618 |
Product | Ribonuclease H |
Protein accession | YP_003093229 |
Protein GI | 255532857 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGAAA TTTATACAGA CGGAGCGGCC AGCGGAAATC CCGGACCAGG TGGATACGGT GTGATTTTAC GCTCAGGTAA CCACTATAAG GAACTGAGTG CAGGCTTCCG TTTAACCACC AATAACAGAA TGGAACTGAT GGCTGTTATT GTAGGTTTAA ATGCATTAAA AACACCCGGA CAAGAAGTAA CTGTATTTTC TGATTCTAAA TATGTAATCG ATTCTGTAGA AAAAAAATGG GTATTTGGCT GGGTAAAAAC AGGCTTTAAA GGAAAAAAGA ACAAAGACCT CTGGATGCAG TTCTTAAATA GCTATAAACT GCACCACGTT AAATTTGTAT GGATAAAAGG GCATAACAAC CACCCTGAAA ATGAAAGATG TGACCAGCTG GCCGTTGCAG CCTCAAAAAA CAGGGCAGCA TTGGCTATCG ACGGCCCATT TGAAGCAGAA AAAAACAGTG CATCATTGCT TTAA
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Protein sequence | MIEIYTDGAA SGNPGPGGYG VILRSGNHYK ELSAGFRLTT NNRMELMAVI VGLNALKTPG QEVTVFSDSK YVIDSVEKKW VFGWVKTGFK GKKNKDLWMQ FLNSYKLHHV KFVWIKGHNN HPENERCDQL AVAASKNRAA LAIDGPFEAE KNSASLL
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