| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2937 |
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| Symbol | |
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| ID | 8254048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3501326 |
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| End bp | 3502645 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936585 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_003093197 |
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| Protein GI | 255532825 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.673839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.173134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAG TTGCATTTTA TACACTGGGC TGTAAGTTGA ATTTCTCTGA AACATCAACA
ATTGGCCGCT TATTTACCGA TGCAGGCTAT GCCGTTGTAG ATTTTACCGA CGGCGCTGAC
GTATACGTGA TCAATACCTG TTCTGTAACA GAACATGCCG ATAAAAAATG CCGGAAGGTA
GTTAAAGAAG CCCTAAAATA TGCCCCTCAT GCCTATGTTA CGATTGTGGG CTGTTATGCC
CAGCTAAAAC CAGCTGAAAT AGCAGAGATA GAGGGGGTAG ATATGGTACT CGGTGCAGCC
GAAAAATTCC GTATTGTAGA ATTCATCTCC GATCTTACCA AACAGCCCAA AGCGGTTGTC
CATCAGCAAA ATATAGAAAA AGTAAACCAT AATTTCATTG CAGCCTATTC TATTGGCGAC
CGTACCCGTA CTTTTTTAAA AGTACAGGAT GGCTGCGATT ATCCATGCAC TTATTGCACC
ATCCCGCTGG CCAGGGGGGG GAGCAGGAGC GATACCATCG AAAATGTAAT CAACCGGGCC
CGGCAGATTG CCGAAAGTGG GGTAAAGGAA ATTGTTTTAA CAGGGGTAAA CCTCGGCGAT
TTTGGCATCA GGAACGGCGA ACGTGAAGAC AAGTTTTTCG ACCTGGTAAA AGCACTTGAT
GAAGTTGAAG GCATAGAAAG GATCAGGATC TCTTCTATAG AGCCCAACCT GCTCAGCAAC
GAGATCGTCG AATTTGTGGC AACTTCTAAA AGGTTTGTAC CCCATTTTCA CATTCCTTTG
CAGTCGGGTT CCAATAAAAT ACTGGGCCTG ATGCGCAGGC GCTACCAAAG GGAACTGTAT
ACCGAGCGCG TAGCTAAAAT AAAGGCTGTA ATGCCCAACT GCTGCATTGG TGTAGATGTC
ATTGTCGGAT TCCCGGGCGA AACGCAGGAA GACTTCCTGG ATACTTACCA GTTTTTAAAT
GAACTGGACA TTTCATACCT GCACGTGTTT ACCTATTCCG AACGGGAACA AACAGCGGCT
GCCGAAATGA AAGGCCGTGT AGCAGGCAGC ACCCGTGCCG AGCGCAGTAA AATGCTGCAC
ATCTTATCAG ACAAGAAACG CAGGGCCTTC TATCAGTCGC AGATCGGAAC AGTGGGCGAA
GTGCTTTTTG AAGACGATCA GAAAAATGGC TTTATGCATG GATTTACCAA AAACTATGTA
AAAGTAAAGG CAAAATACGA TCCGGTAATG GTGAATGAAA TCAAAACGGT TAAACTGGTA
GAACTAACTG CCGACGGAGA GGTAGAAGTT GCAGAAACAG CAGAAGTATT AGCGCATTAA
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| Protein sequence | MKKVAFYTLG CKLNFSETST IGRLFTDAGY AVVDFTDGAD VYVINTCSVT EHADKKCRKV
VKEALKYAPH AYVTIVGCYA QLKPAEIAEI EGVDMVLGAA EKFRIVEFIS DLTKQPKAVV
HQQNIEKVNH NFIAAYSIGD RTRTFLKVQD GCDYPCTYCT IPLARGGSRS DTIENVINRA
RQIAESGVKE IVLTGVNLGD FGIRNGERED KFFDLVKALD EVEGIERIRI SSIEPNLLSN
EIVEFVATSK RFVPHFHIPL QSGSNKILGL MRRRYQRELY TERVAKIKAV MPNCCIGVDV
IVGFPGETQE DFLDTYQFLN ELDISYLHVF TYSEREQTAA AEMKGRVAGS TRAERSKMLH
ILSDKKRRAF YQSQIGTVGE VLFEDDQKNG FMHGFTKNYV KVKAKYDPVM VNEIKTVKLV
ELTADGEVEV AETAEVLAH
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