| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2903 |
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| Symbol | |
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| ID | 8254014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3463972 |
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| End bp | 3465726 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936551 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_003093163 |
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| Protein GI | 255532791 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00422026 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACAC AAAATTTGGA CACACCAAAT AACTTTTTCG AGAATAAGGT ACTCGGACAT
CCGGCTGGAT TGTTTGTCCT TTTCTTTACC GAGATGTGGG AACGGTTTTC TTATTATGGC
ATGCGGGCCT TGCTGGTGCT GTTCTTAATT TCAAACCTGG ATAAAGGTGG CTGGCACTGG
CCGGAAGAGA ATGCACTGGC TTTATATGGC ACTTATACCT CACTGGTGTA CCTGACCACC
ATTATGGGTG GCTACCTGGC CGACAAATAC CTGGGCTACC GCTGGGCTGT AGTTATTGGT
GCCTGTCTGA TGACCATGGG CCATGCCAGT ATGGCGGTAG AAACACCGAC GTTCTTGTAC
CTGGGCATCG GTTTCCTGAT TTTTGGAAAC GGCTTTTTCA AGCCCAACAT GACCTCTATT
GTTTCTTATA TCTATAAAGA CCATCCTGAA AAGAAAGATG GTGCCTATAC CATTTTTTAT
ATGGGTGTAA ATGCAGGTGC ATTTCTGGGC ATTATGCTGT GTGGTTACAT CGGCGAAACG
GTGAGCTGGA GCTGGGGATT TGGTCTTGCG GGTATTTTCA TGTTTTTTGG TATGCTGCAG
TTCTATTTTA CCCAGGGTAT TTTTGGCGAT GTGGGTAAAA GACCTACAGC TGAAGATAAC
CTTAAAAAGG CCAGCAACGA TGATGGCGAC AAAAGGGTAC CTTTCACTAA TCTTGACCTG
ACTTTAATTG TGGTTTCTTT GTTACTGGGC CTGGTATGGA TCCTGAACGA TCCTTATTCT
AAGATCAGCG GCAACAATTT ACTTGATTTT ACGGCACTGG GCTTATCCGG ACCAAGCTTT
ACCATTATCA GTGGTGTAAT CATATTTTTA GTTTTACTGA TCAGCAGGAT CCTGCGTTAC
ACTAAAGTAA CCAGGGACCG TTTAATTGCC GTAACCATAT TTGCTTTCTT TACGGTATTC
TTCTGGGCCT CTTTTGAGCA GGCTGGTGGT TCTATGACCA TCTTTGCCGA TAAATATACA
CAGCGTGATT TTTCCGGCAG CGCAGCTGCC ACCTTTAAGA TCATCAATAC CCTGCTAACA
GTAGTACCGC TTGGCATCAT CACGTTTGTA CTGTGGAAAC TGTTTACCCA GACTTTTAAA
AAGTTTGCTG TTGGAAATAT GATCCTGGGA ACCAGTTTTG TGGTGATCTG GGCTGTAGTG
ATCTGGATGC TGAACAATGA GTTCCAGAAA GAGACCACTA CTGTAGCCGC TTCCTGGTTT
GGTATTTTAA ACTCCTTTTT TATCATTTCT TTTGCACCCC TGGTCTCAAA GATCTGGGAA
AGCAAATACA ATCCGCCTGC AGCATTTAAA TACGGACTGG GCATGACCCT GCTGGGTCTG
GGCTTTGCCT CTCTGGCCTA TGGTGCGTCG GCCATTACAG GTCCCGATGC CTCTATAAAA
GTGAGCATGG TCTGGCTTAT CTTTGCTTAT CTTTTCCATA CACTGGGCGA ATTGTGCCTG
TCACCTGTGG GCTTATCTTA TGTCAGTAAA CTGGTGCCTG CAAGGATGAT CGGTGTGATG
TTCGGCATCT GGTACCTGGC CATTGCCATT GGCAATAAAA CGGCAGGTGC AATGGGTGGT
ATGATCAATG AAATTACCCA TAAATATTCG CTTTCCACAT TTTTCCTGAT CTTTACCCTG
GTGCCGGTTG GCCTGGGTAT CCTGGTGATG TTGTTACATC CCCTGCTTAA ACGGTTAATG
CACGGTGTCA GATAA
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| Protein sequence | MNTQNLDTPN NFFENKVLGH PAGLFVLFFT EMWERFSYYG MRALLVLFLI SNLDKGGWHW
PEENALALYG TYTSLVYLTT IMGGYLADKY LGYRWAVVIG ACLMTMGHAS MAVETPTFLY
LGIGFLIFGN GFFKPNMTSI VSYIYKDHPE KKDGAYTIFY MGVNAGAFLG IMLCGYIGET
VSWSWGFGLA GIFMFFGMLQ FYFTQGIFGD VGKRPTAEDN LKKASNDDGD KRVPFTNLDL
TLIVVSLLLG LVWILNDPYS KISGNNLLDF TALGLSGPSF TIISGVIIFL VLLISRILRY
TKVTRDRLIA VTIFAFFTVF FWASFEQAGG SMTIFADKYT QRDFSGSAAA TFKIINTLLT
VVPLGIITFV LWKLFTQTFK KFAVGNMILG TSFVVIWAVV IWMLNNEFQK ETTTVAASWF
GILNSFFIIS FAPLVSKIWE SKYNPPAAFK YGLGMTLLGL GFASLAYGAS AITGPDASIK
VSMVWLIFAY LFHTLGELCL SPVGLSYVSK LVPARMIGVM FGIWYLAIAI GNKTAGAMGG
MINEITHKYS LSTFFLIFTL VPVGLGILVM LLHPLLKRLM HGVR
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