| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2890 |
|---|
| Symbol | |
|---|
| ID | 8254000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3444745 |
|---|
| End bp | 3446316 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644936537 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_003093150 |
|---|
| Protein GI | 255532778 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAACCTATTT GAAGCATAGT ACCTGGGTAA CCGCATTTGC TTTTTCAGTT
TGCCTGGTTT TGCTCAGCAA AACAAAATTG CAGGCCCAGC AACAAAAGAA GCTGCCCAAT
ATTGTATATA TTCTGGCTGA TGATCTGGGC TATGGCGATA TTAAAATTTA CAATGCAGGT
GCAAAAGTAA ATACACCCCA CATTGATAAA CTGGCCGAGC AGGGCATGCG CTTTACAGAT
GCGCATACCA CATCATCTGT ATGCACGCCT TCGCGCTATT CTATTCTGAC CGGTCGCTAC
CCCTGGCGCA GCAGGCTTCC GGTAGGTGTA TTGAGAGGGT ATAGCAGAAC ATTGATAGAA
GAAGGCCTGC CAACGGTAGC CGGTTTGTTG AAAACAAGCT CCTATCGCAC AGCGGTAATT
GGGAAATGGC ATTTAGGATT GGATTGGATG CCAAAAGAAG CATTCAAAGA TTCTATTAAT
CCCGCTTTTA ACAAAGACAG GCTGTACGGC ATTACCGATG AAATGAATCC GGATCAGATA
GATTTTGGAA GAGCACCCGT TCGTGGCCCG CGTACACAAG GTTTTGATTA CTCCTATGTG
CTGCCTGCCT CTCTGGACAT GCCGCCATAT GCCTATCTGG AGAATGATCA GCTAACAGAG
CCGCTTACGG GCTATACACC AGGTAATAAA TTGGCCAGCG GCTATACCGG CCCCTTCTGG
AGGGCCGGCT TAAAAAGTCC CTCATTTGAT TTTTACGGTG TATTGCCGGC CTTTACCAAT
AAGGCCACCG ATTTTATTAA AAAAGAGGCT GCAACAAAAA ATCCTTTCTT CCTGTATTTC
CCTATGCCGG CACCACATAC CCCATGGATG CCTACCGCCG AATACCGGGG TAAATCGCAG
GCAGGGGAAT ATGGTGATTA CTTACAGGAA GTTGATGCTG CAGTAGGTAA AATATTGCAG
GTATTGGACA GCCTGGGCTT ATCAAAAAAT ACCTTAGTGG TGTTTACCAG CGACAACGGG
CCTTACTGGC GGGATGATTT TGTGCAGCAA TATGGCCACC ATGCTGCGGG GCCATTCAGG
GGAATGAAAG GCGATGCTTA TGAAGGTGGC CACAGGGTTC CTTTTATTGT GCGTTACCCC
GGTAAAGTAA AAGCAGGGAC CATTAGTAAT GTAACAACCA CCCTTGCCAA CCTGATGGCC
ACCTGTGCCG ATTTAACTGG CAACCATGCT GTCCAGTTTG AAACGGAAGA TAGCTACTCC
ATTTTACCGG TATTGCTTGG TAAAGCTGCC GGGATTGCAG AACAGCCGGC CATTGTCAAT
ATTTCTTCCA AAGGGTTTTA TGATATCCGG AAAGGGCCCT GGAAATTGAT TACCGGTTTG
GGTTCCGGAG GGTTTTCGGT ACCCTCAATA GTTAAGGCCC CTGAAGGGCA AGCTGCCGGG
CAATTGTACA ACCTGGATAC AGACATTAAA GAAGAGACAA ATTTGTATAG CCGGTATCCT
GAAAAAGTAA AAGAACTAAG CGCCTTATTG GAAAAAATAA AAGCAGCGCC CAAAGGAAAA
CGTGCAAAAT AA
|
|---|
| Protein sequence | MKKITYLKHS TWVTAFAFSV CLVLLSKTKL QAQQQKKLPN IVYILADDLG YGDIKIYNAG
AKVNTPHIDK LAEQGMRFTD AHTTSSVCTP SRYSILTGRY PWRSRLPVGV LRGYSRTLIE
EGLPTVAGLL KTSSYRTAVI GKWHLGLDWM PKEAFKDSIN PAFNKDRLYG ITDEMNPDQI
DFGRAPVRGP RTQGFDYSYV LPASLDMPPY AYLENDQLTE PLTGYTPGNK LASGYTGPFW
RAGLKSPSFD FYGVLPAFTN KATDFIKKEA ATKNPFFLYF PMPAPHTPWM PTAEYRGKSQ
AGEYGDYLQE VDAAVGKILQ VLDSLGLSKN TLVVFTSDNG PYWRDDFVQQ YGHHAAGPFR
GMKGDAYEGG HRVPFIVRYP GKVKAGTISN VTTTLANLMA TCADLTGNHA VQFETEDSYS
ILPVLLGKAA GIAEQPAIVN ISSKGFYDIR KGPWKLITGL GSGGFSVPSI VKAPEGQAAG
QLYNLDTDIK EETNLYSRYP EKVKELSALL EKIKAAPKGK RAK
|
|---|
| |