| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2840 |
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| Symbol | |
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| ID | 8253948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3382611 |
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| End bp | 3385580 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936486 |
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| Product | polysaccharide lyase family 8 |
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| Protein accession | YP_003093101 |
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| Protein GI | 255532729 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.109346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0108324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CAATATTGAT ATGCTTGATT ATTTTTCTTA ATCTGGGTGT ATTTGCCCAG
GAAAAAATAT TCGCCGGTTA TTTCGATGTA GAAGTCAATA GTCCCGCCAA TACGGAGGTA
ACAGGACGTA TACATCTGGA AAGAAATAAG GATGTATTGA AGCGCCCTGT CCCTAAAACC
TATCAGTTTG CCATAACCAG TCAAAAGAAC AATTTGTTTA GCATTGAAAC CCGTTTTGAT
CCAGTTGGTA GAATCATGGG AGTACTTTCT ACGAAGCAAA AGTTGGGAGA AAACCTATTG
GGAAATCAGC AATTAACGAT AGTGTTAAAA GATGGGTCAA AACAGCTTAA TTCTTTTCCA
ATTACCATAA AAGTAGTTAA GGAAACCCTG TGGAAAACAC TTTATGAGCG ATATAAGGAT
TATACAGTAT CGTCTGAAGG GAGTAGAATG TATGGTAGAA AACTCATTTC GGATGTAAAA
GTAGCCGAAA TGATTACTGA ACTGGAAAGT AATAATGGCA AATTTGCAGC ATTTGGTTTT
TACGGCAAAA ATCCGATGGA ATATAAAAGC CCTGGTGGAA AAACGATAGA ATTTGAGTGG
GAACAAGTGG CAAATCAAAT TGGTGGTTTG GGCTACGCTT ATGCCAAATC AAAAAAGTAT
GGACCAAATG GCGATCCGCA GGCCCGTATG CAGTTAAAAA ATGCTTTATA TTCAGCTATT
ATCGCTTATA CGGAGAGCGT TCCGGTTGAA GGTTCAGATG TAATGGTAAA GGGTAAGCCG
ATAGGCCCGT ATACGGGCGA CGGTTTTAGT AACCTGAAAG AGTATAACCT GGTGGGAACC
CAGGTGGTAA CCCACCAATG GGTTATTTCT GATGCGCTCA TTGCACCATC AGTACATTTA
ATACCAGATA TGCTTACAGA CATTAAACAG GGCAACAAAC AGGCCGAACG TGTGTATTAC
GATTTTATAC GTTTTTACCA AACCGCAATG GCCGAAATGA TCGGCAGAAG ATCGATCGAT
AAATCGGACG ATAAAGAAGA GGGTGGTCGC TGGGGGATAT TGCAGGATAC CCTTCGTTCA
TCAGGTGCCT GGGCAGATGC CAACCTGGGG CACAGAGGTC GCTGGATGTT GGCCATGCCC
ATTGTTTGGG CAGATTATAA CCGGCCTTTA ACTTATGTGC AATACTGGTA CAGTGATTTC
TATAAGGATA AACCATTTAA AAATTTTAGT TTTTCTTACG GATGGAGCCC GCATGGTGTT
GCAGCTGATG TGTCCAGGTG GTTAACCAAA TTTAATGTAC CTGCTCACGA ATACAAACAA
TCTGGTTTTC AGCCAGATGG AACCATATCA CACCATATTG CTCAGGGTAC TGATGCGGCT
ATGCAGGCTT ATGGCTTTGG ATGGCTTGTT GAAGCATTTG TTGGTTTTAA CCAGTTTAAA
GATACGGACT TTAAGCTGGC CGATAAATAT TACCAGTTTC CTGCCGATAG GCTGGTAGGT
ACTTATCCGA AATTGATTTA TAAAAACCGC CTGGATTTTT TAGTATCCGG GAGGTCTTAT
GGAGAGGATC TGCAGAAGTT TGTTACCAAA GTTTATTTGT CTGCTTTTGA AGATTTGCAG
GAGGCACGAA GCAAAGATAC GAAGCTAAGC AACCAGGCCG AACTGGATGA AATATACAAT
AAGATCAAAA AAAATAAATT TGAATATTCC GGTACTGATG CTTTTTGGGT AAATGAGTTT
TTGGTGCATC GCCGGGGCGA AAATGAAAAA CCTTTTTATG TATCGCTAAA ATTAAAATCG
AAACGCACGG TTGGGGCTGA AGATTTTGGA AACATACGCA GGTCCTGGTA TGCAGGTTAC
GGGATTCTTC CACTAAAAAT AAGTGGCGAT GAATATTCGG ATAAAGTACT GGCCAACCTG
GACTGGCATG CTCTGCCCGG TCTAACTGAA GAATGGCGTA GCGATGCTAT TCCGGTTGGC
CATGCACAGG CTTCTTTGCC AGGCGATAAT GAGGTGGCTG GTGTAACGTC GGATGGACGA
TCGGGTGTAG CCATTTATCA CCATCTGCCA AGGGAAACAT ACAGCTCTGC TACAGCTTTA
AAGAGCTATT TTTTTATAGC CGATAAAATC ATCGCCCTGG GCAATAACAT CAAAAGACTG
CGCCCCGGTC AGCAAAAAGA GATTGTAACG ACGCTTGATC AGTCAGCATT TACCCAGCCG
CTAACCATCG CCCAAAATGG TAAAACTGAA GTGGTACAAC CAGGACAGTC GGTTAATCTT
TCTTTTGAAG CTGATAAACC TGTTTGGTTA CATATTGGCA ATAAGGGGTA TATCATTTAT
CCGGATGGAA AACAAAAGAT AATCGTTAAA ACCGGAACTG AAATAAATAT TACCGACCCT
GCCAATGCAT CAAAAACGCC TGGTTATATC ATTGCGGTCA ATCACGGACA GGAACCTGCA
ACAGGTAATG GTTATAGTTA TTTTCTGGTA CCTAATGTTT TGGCCACAGA AATGCCTGCT
GTACTTGCCA CTTATGCAAA AGATGTACAG ATAAAAAAGG CTATAGATGC ACATGGGGTG
TATTCGGCAA CAGATAAAAC CTGGCAAACG GCTTTTTTTA AAGGGACAGC AATCACAGTG
GGCGGGTTAA CCGTAAAGGC TGAAACGCCT GCTTTGATGA TTTTGAAAGA CAATGGCAGC
AATTGGAAGC TGACAATGAG CAACCCTTCA CCATCTGCCG ACAAACAACA ATTGGTCTTG
TATGTGTCAC AACCGCTCAG GGCTGGTAAG TATGATTATA TGTTGGGTGG TATCTATCCC
CGCAAGGGCG AGTATGTAAC GGTCTCGGCC GAAGGTACAG GTTCTAAAAT TGTGGCAGAA
CTTCCTGATA AAAGGGATAG TGCTTTTTAC AATTACCAGG AGGTATTGTA TAATGCCGCA
CCAGTTAGTA TAGAAATTCC AAAGAAATAA
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| Protein sequence | MKKTILICLI IFLNLGVFAQ EKIFAGYFDV EVNSPANTEV TGRIHLERNK DVLKRPVPKT
YQFAITSQKN NLFSIETRFD PVGRIMGVLS TKQKLGENLL GNQQLTIVLK DGSKQLNSFP
ITIKVVKETL WKTLYERYKD YTVSSEGSRM YGRKLISDVK VAEMITELES NNGKFAAFGF
YGKNPMEYKS PGGKTIEFEW EQVANQIGGL GYAYAKSKKY GPNGDPQARM QLKNALYSAI
IAYTESVPVE GSDVMVKGKP IGPYTGDGFS NLKEYNLVGT QVVTHQWVIS DALIAPSVHL
IPDMLTDIKQ GNKQAERVYY DFIRFYQTAM AEMIGRRSID KSDDKEEGGR WGILQDTLRS
SGAWADANLG HRGRWMLAMP IVWADYNRPL TYVQYWYSDF YKDKPFKNFS FSYGWSPHGV
AADVSRWLTK FNVPAHEYKQ SGFQPDGTIS HHIAQGTDAA MQAYGFGWLV EAFVGFNQFK
DTDFKLADKY YQFPADRLVG TYPKLIYKNR LDFLVSGRSY GEDLQKFVTK VYLSAFEDLQ
EARSKDTKLS NQAELDEIYN KIKKNKFEYS GTDAFWVNEF LVHRRGENEK PFYVSLKLKS
KRTVGAEDFG NIRRSWYAGY GILPLKISGD EYSDKVLANL DWHALPGLTE EWRSDAIPVG
HAQASLPGDN EVAGVTSDGR SGVAIYHHLP RETYSSATAL KSYFFIADKI IALGNNIKRL
RPGQQKEIVT TLDQSAFTQP LTIAQNGKTE VVQPGQSVNL SFEADKPVWL HIGNKGYIIY
PDGKQKIIVK TGTEINITDP ANASKTPGYI IAVNHGQEPA TGNGYSYFLV PNVLATEMPA
VLATYAKDVQ IKKAIDAHGV YSATDKTWQT AFFKGTAITV GGLTVKAETP ALMILKDNGS
NWKLTMSNPS PSADKQQLVL YVSQPLRAGK YDYMLGGIYP RKGEYVTVSA EGTGSKIVAE
LPDKRDSAFY NYQEVLYNAA PVSIEIPKK
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