| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2703 |
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| Symbol | |
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| ID | 8253811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3175708 |
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| End bp | 3177498 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936351 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003092966 |
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| Protein GI | 255532594 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.487466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACGA CTAATTATTT TCTTACAATT GTACTTTTTT TTGCCTGCAC CCTTTCCATT
CATGCGCAAA CCATGGATGA AATGTGGGAC AGCAGTGTAT CCGGTAAAGC AAACCCCAAT
TTAAAATGGT TTAAGGAAGC AAAGTTTGGC ATGTTTATCC ACTGGGGGCT GTATGCAAAA
CTTGCCGGTG AGTGGAAAGG CAAACGCTAT TATGGCAGTG GGGAGTGGAT CATGAGCCAG
GCCAGAATAC CGGTTGCTGA GTACAAAGAA GTAGCCAAAA CTTTTAATCC CATTAAGTTT
AATGCGGATG AATGGGCGCA GCTGGCTAAA GATGCAGGGA TCAAATACAT GGTAATTACT
GCCAAACACC ATGAAGGCTT TTCTATGTTT GATACTAAGG TGAGCGATTT TGACATTGTG
GATGCTACAC CTTATAAAAA AGACCCGATG AAAGCCTTAG CCGAAGCTAC CAGGAAAAGG
GGCATTCAGT TTGGGTTTTA CTATTCACAG TTCCAGGATT GGTATGAGCC AAATGGTGGA
AAAAACAGCT GGGATTTTGA CGAGACGAAA AAAGATTACC AGAAATATTA CAGGGAAAAA
GCCATACCCC AGTTAAAAGA GCTGCTTGGC AATTATGGTC CTTTGGGAAT TGTATGGTTT
GATACTCCCG GGGGCATGAC CAAAGAACAG ACCCTGAACT TTGTAAATGA CTTAAGGGTA
TTGCAGCCAA AAAGCCTGTT TAGCAGTCGC GTTGGCCATG GTCTGGGCGA TTACAGGGAT
TTTGGCGATT CGGAAGTGCC AGACACGCCG ATAAAAGGGG CCTGGGAATC TATTTATACG
CACAACGATT CATGGGGCTA TATTAAACAT GATATGAATT TTAAAACCCC TGCAGAAATT
ATCAGGCTGC TGGCCAATGT AGCTTCAAAA GGTGGTAACC TGATGCTGAA CGTAGGGCCC
GACGGGGAAG GCAATATTCC CGAATATTCG GTAAAGTTTT TAAAGGAAAC GGGTAAATGG
CTGGATAAAA ACGGAGAAAG TATTTACGGC AGTACCTATG GCCTGATCCC GGCACAGCCC
TGGGGGGTAA GTACCTCTAA ACCGGGTAAG CAGTACTTAC ATGTCATGCG CAGGCCTTTG
GATGGGAAAC TGTTGATACC TGATTTTAAA GGTAAAGTTG CAAAAGTCTA TAACCTCGTT
AGCCAGCAAC AACTGAGTTG GAAAAATACA GGTAAAGATA TATGGATCGA TTTGCCTGTT
TTTGAGGCAG ATGCTGCAAA TACGGTGGTT GTGGTAGAAT ATTCGGGTAA AATTGACGAT
TATGACCTGA AGGTGCCCAT TACGGTTTCC GGTCAGTACC CCGAAAATAT AGTGGGGGCC
ACTTATGCCA GACTAAAGGG GAATGCGAAG ATCCAGAGTT TAACCTATAG CCATTATTAT
GGCGACTGGA AGCATACCGT TTGCGTAACA GATATCAAAA GCAACAATGA CGAAGCTGAT
TTTGCCATTC GTGTTACCGA ACCCGGGGTT TATAAAATTG CGCTGGAATA TTCCTGTGCA
CCCGAAAGTG CCAAACAGGA GGGTAGCATG ACGGTAAATG GCCAGGAGTT TCTGTTCCGT
ACATTGAGGA CCTCAGATTT TGATAAAAAA GCACCTTTGC CATTTATTAA ACATGTGATA
GCCACCACTA CTTTCAGTAA AGCTGCTGAT TACCAGATCA GCATCCGGCC TTTGCAAAAT
GGAATTGAGT TATTTAAGTT AAAATCAGTT ATATTGGAAC CTGTAAAATA A
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| Protein sequence | MRTTNYFLTI VLFFACTLSI HAQTMDEMWD SSVSGKANPN LKWFKEAKFG MFIHWGLYAK
LAGEWKGKRY YGSGEWIMSQ ARIPVAEYKE VAKTFNPIKF NADEWAQLAK DAGIKYMVIT
AKHHEGFSMF DTKVSDFDIV DATPYKKDPM KALAEATRKR GIQFGFYYSQ FQDWYEPNGG
KNSWDFDETK KDYQKYYREK AIPQLKELLG NYGPLGIVWF DTPGGMTKEQ TLNFVNDLRV
LQPKSLFSSR VGHGLGDYRD FGDSEVPDTP IKGAWESIYT HNDSWGYIKH DMNFKTPAEI
IRLLANVASK GGNLMLNVGP DGEGNIPEYS VKFLKETGKW LDKNGESIYG STYGLIPAQP
WGVSTSKPGK QYLHVMRRPL DGKLLIPDFK GKVAKVYNLV SQQQLSWKNT GKDIWIDLPV
FEADAANTVV VVEYSGKIDD YDLKVPITVS GQYPENIVGA TYARLKGNAK IQSLTYSHYY
GDWKHTVCVT DIKSNNDEAD FAIRVTEPGV YKIALEYSCA PESAKQEGSM TVNGQEFLFR
TLRTSDFDKK APLPFIKHVI ATTTFSKAAD YQISIRPLQN GIELFKLKSV ILEPVK
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