| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2701 |
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| Symbol | |
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| ID | 8253809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3173426 |
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| End bp | 3174304 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936349 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003092964 |
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| Protein GI | 255532592 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.485012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.370839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAC AACTACTTAA AGTATCTATG GAGCCTGCAC AATCCTTTAG TGTAAGGCAA
GATCTGGAGC CTTCTGTTAA TAATAAATGG CACTATCACC AGGAAATTGA ATTGATCTAT
TTTAATAAAG GCGACGGTAC ACAATTTATC GGCGACAGCA TTAAACGTTT TAAATCTGGT
GACATTGTTT TACTGGGGGC CAACCTGCCA CATTACTGGA GGTTTGATGA TGCCTATTTT
ACAACCGATA CCAAACCGGC AGCAGCCGAT ATAAGGGTAG CCCATTTTAG TGAGAACCTG
TTTGGCGAAT GCTTTTTAAA CCTTCCTGAA AATAAGCTGC TCAAAGATAT TTTAGAAAAA
GCCAAAAGAG GCGTAAAGGT AACGGGTAAA AACAAGGCTG TTGTGGCAGA ATTAATTACC
CGGATGTTGA AAGCCGAGGG CACAGAAAGG ATCATTATTT TGATGCAGGC GCTGGTAGAA
ATTGCCAGAT CGAGCCAGCT TGAAGTGCTT TCTTCTGTAG GTTTTCATTA CGACCTGGAA
ATGATTGAGA AAGACAGGAT CAACGACATT TACGACTATA CTTACGCCAA TTTCAAAAAT
AAGATCTACC TGGAAGAGAT TGCTGAAGTT GCCAGGATCA GTCCCAATTC TTTTTGCCGT
TATTTTAAAT CACGGACACG TAAAACCTAT TCGCAGTTCT TAATAGAGGT TAAAGTAGGG
CAGGCCTGTA AGTTGCTGAT AGAGCATAGC CTAAACCTGA AACAGGTGTG TTACAACAGT
GGTTTTAACA ATTTTGCCAG TTTCCATAAG TGCTTTAAAA AGATCACCGG CAAGAGCCCG
CTATGCTACC AGAAAGAGTT CGTTAGCGCC TGCGCCTAA
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| Protein sequence | MKAQLLKVSM EPAQSFSVRQ DLEPSVNNKW HYHQEIELIY FNKGDGTQFI GDSIKRFKSG
DIVLLGANLP HYWRFDDAYF TTDTKPAAAD IRVAHFSENL FGECFLNLPE NKLLKDILEK
AKRGVKVTGK NKAVVAELIT RMLKAEGTER IIILMQALVE IARSSQLEVL SSVGFHYDLE
MIEKDRINDI YDYTYANFKN KIYLEEIAEV ARISPNSFCR YFKSRTRKTY SQFLIEVKVG
QACKLLIEHS LNLKQVCYNS GFNNFASFHK CFKKITGKSP LCYQKEFVSA CA
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