Gene Phep_2696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2696 
Symbol 
ID8253804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3162335 
End bp3163522 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content47% 
IMG OID644936344 
Producthypothetical protein 
Protein accessionYP_003092959 
Protein GI255532587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000585774 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.273153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAT TTCTTTTAAT CATATTTACA GTAGCGGGCA TGATTGGGCA ACCATCATGT 
GCTGCTGTAA AGGCTGGGCC AGACGTTTCG CTTGTGGCAG ATAAAGAAGT GGGCAGGACT
TTAAAAGCAC TGATCCTGAA AAATGCCGCA TGGGCAATGA AGCAGGAACC TGTAACGGTA
ACTGCAGAAA GCTCGTCCCG GAGTGCCGGT GGAAAGCATG ATTTTTATTC GGAAGGAGAT
TACTGGTGGC CGGATCCACA AAATCCGGAC GGCCCTTATA TCCAGAAGGA TGGCATGACC
AATCCGCAGA ATTTTGTTGC CCACCGCCTG GCGATGATCC GTTTCAGCAA GATCATCGGG
GCTTTGGCTT CCGCTTATAA GCTGACCGGT GAAGAAAAGT ATGCGAAGCA GGCCATGCGG
CATTTGCAGG CCTGGTTTAT CAATGAAGCA ACAAAGATGA ACCCCAACCT GCTGTTTGCC
CAGGCCATCA AAGGCCGGTT TACCGGTAGG GGTATAGGTA TTATAGATAC AATTCAGCTG
ATGGAAGTGG CCCAGGGTAC CATTGTGATG GAAAAGGTGC TGGATGCGGG TGTACTGGCC
GGAACGAGAA AATGGTTTGC AGCCTACCTG GAATGGCTGA TGACGCACCA GTATGGCAAA
GATGAAATGA ATGCCACAAA CAATCATGGT ACCTGTTTTA CCATGCAGGT GGCTTCATTT
GCTAAGCTTT GCCAGGATAC GAAGCTGATG GACTTTTGCC GGGACCGGTA TAAAAACGTT
TTGCTGCCTA ACCAGATGGC AGCAGATGGC AGTTTTCCGA GAGAACTGGG CCGTACAAAA
CCATATGGTT ATTCGATTTT TAACCTGGAT GCGATGACTA CCCTTTGCCA GATCTTATCT
GTTAAAGCGG ATAACCTCTG GACCTACAAA ACTACGGATG GAAAATCAAT AGATAAAGGC
ATTGATTACC TGTACCCATT TGTAGCCGAT AAAAGCAAAT GGCCTTTAAA GCCTGATGTG
ATGTATTGGG AAAACTGGCC AGTGGCACAG CCTTTCCTGG TATTTGGGGC AAATGCTTAC
CAGAGAGCAA ATTGGCTGAA TACCTGGAAG AAACTGGACC ACGATCCAAA AGTAGAAGAA
GTGATCAGGA ATTTGCCGGT GAGGAACCCA TTGATCTGGC TGGATTAA
 
Protein sequence
MKGFLLIIFT VAGMIGQPSC AAVKAGPDVS LVADKEVGRT LKALILKNAA WAMKQEPVTV 
TAESSSRSAG GKHDFYSEGD YWWPDPQNPD GPYIQKDGMT NPQNFVAHRL AMIRFSKIIG
ALASAYKLTG EEKYAKQAMR HLQAWFINEA TKMNPNLLFA QAIKGRFTGR GIGIIDTIQL
MEVAQGTIVM EKVLDAGVLA GTRKWFAAYL EWLMTHQYGK DEMNATNNHG TCFTMQVASF
AKLCQDTKLM DFCRDRYKNV LLPNQMAADG SFPRELGRTK PYGYSIFNLD AMTTLCQILS
VKADNLWTYK TTDGKSIDKG IDYLYPFVAD KSKWPLKPDV MYWENWPVAQ PFLVFGANAY
QRANWLNTWK KLDHDPKVEE VIRNLPVRNP LIWLD