Gene Phep_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2678 
Symbol 
ID8253786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3137385 
End bp3138026 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID644936326 
Productprotein of unknown function DUF47 
Protein accessionYP_003092941 
Protein GI255532569 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.509665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA TTTTTAATTT CTTTAGCCCG AAAGACAAAG TCTTCCAGCC TTTATTTGAA 
CAGGCCGGAA ATAATCTGGT TGATATTTCT GAGGCACTGG TCAATGCAGT AAATGCTCCC
GACCAAAAAA AAAGAAAAGA ATATATCAGG GAAGTTGAAA AACTGGAACA GGCCGGAGAT
GACATTACAC ATTCTGTTTT TATGGGCCTG GGCAAAACAT TTATTACTCC TTTTGACAGG
GAAGATATCC ATGCGCTCAT CAGTTCGCTG GATGACATTG CCGACTATAT TTACGCTGCC
GCAATGAATA TTGACCTATA CAATATTAAA GCTATAAACA CAGCCATGAT CAACCTGGCC
GAACTGCTGC TCGAAATGTG CACAGACCTG AACAAAGCCA TAAGGGAGCT CCGCAGTTTC
AAAAATACTG CCCTCATTGC CGAAGTATGT TTAAGGATAA ATGCAGGTGA AAGCCGGGCC
GACCGCATCT GCAATACTGA AGTAGCCAGT TTGTTTGACA ACGAACAGGA TGCCATTGAA
CTGATCAAAC AAAAGGAAGT CTTGCAAATG CTGGAAATGG CCAGTGATAA ATGCGACGAT
GCAGCCAATG TGCTGGAAAC CATTTTAGTC AAAAATGCAT AG
 
Protein sequence
MNSIFNFFSP KDKVFQPLFE QAGNNLVDIS EALVNAVNAP DQKKRKEYIR EVEKLEQAGD 
DITHSVFMGL GKTFITPFDR EDIHALISSL DDIADYIYAA AMNIDLYNIK AINTAMINLA
ELLLEMCTDL NKAIRELRSF KNTALIAEVC LRINAGESRA DRICNTEVAS LFDNEQDAIE
LIKQKEVLQM LEMASDKCDD AANVLETILV KNA