Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2678 |
Symbol | |
ID | 8253786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3137385 |
End bp | 3138026 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644936326 |
Product | protein of unknown function DUF47 |
Protein accession | YP_003092941 |
Protein GI | 255532569 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.509665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCA TTTTTAATTT CTTTAGCCCG AAAGACAAAG TCTTCCAGCC TTTATTTGAA CAGGCCGGAA ATAATCTGGT TGATATTTCT GAGGCACTGG TCAATGCAGT AAATGCTCCC GACCAAAAAA AAAGAAAAGA ATATATCAGG GAAGTTGAAA AACTGGAACA GGCCGGAGAT GACATTACAC ATTCTGTTTT TATGGGCCTG GGCAAAACAT TTATTACTCC TTTTGACAGG GAAGATATCC ATGCGCTCAT CAGTTCGCTG GATGACATTG CCGACTATAT TTACGCTGCC GCAATGAATA TTGACCTATA CAATATTAAA GCTATAAACA CAGCCATGAT CAACCTGGCC GAACTGCTGC TCGAAATGTG CACAGACCTG AACAAAGCCA TAAGGGAGCT CCGCAGTTTC AAAAATACTG CCCTCATTGC CGAAGTATGT TTAAGGATAA ATGCAGGTGA AAGCCGGGCC GACCGCATCT GCAATACTGA AGTAGCCAGT TTGTTTGACA ACGAACAGGA TGCCATTGAA CTGATCAAAC AAAAGGAAGT CTTGCAAATG CTGGAAATGG CCAGTGATAA ATGCGACGAT GCAGCCAATG TGCTGGAAAC CATTTTAGTC AAAAATGCAT AG
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Protein sequence | MNSIFNFFSP KDKVFQPLFE QAGNNLVDIS EALVNAVNAP DQKKRKEYIR EVEKLEQAGD DITHSVFMGL GKTFITPFDR EDIHALISSL DDIADYIYAA AMNIDLYNIK AINTAMINLA ELLLEMCTDL NKAIRELRSF KNTALIAEVC LRINAGESRA DRICNTEVAS LFDNEQDAIE LIKQKEVLQM LEMASDKCDD AANVLETILV KNA
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