Gene Phep_2608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2608 
Symbol 
ID8253715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3054979 
End bp3055596 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content42% 
IMG OID644936258 
Producthypothetical protein 
Protein accessionYP_003092874 
Protein GI255532502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00101879 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.820547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAC GCGATTCTTT AAAAGCCATT GGCTTAACAG CAATAAGTGC AGGAATGGTT 
ATAGAAGCCT GCAAACCTGG TAAAGAAAAA ACATCAAAAG TTGAAGATGG AGCCCAGCCT
GGGAGGCAGG CCTTTGAAAT AGAACGTGAT AAGCAGTTAA ACAGCTATAA GTTTTTTAAC
GACCATGAAA TGGCTACGAT AACTGTATTG GCCGACATTA TTATTCCTAA AGATGATAAA
TCTGGCAGTG CATCGGAAGC TAAAGTGCCC GACTTTATAG AGTTTATTGT AAAAGATATA
CCTTCACATC AGACACCCAT GCGCGGCGGC CTGAAATGGC TGGACCTGCA GTGTTTAAAC
AGGTTCCAAA AAACCTTTAA AGATGCTTCT GCAAGCCAGC AGATTGAAAT GGTAGATGAC
ATTGCCTATC CGGAAAAGGT TAAACCAGGA TTGGAGCAGG GTGTTGCATT TTTTACCCTG
ATGCGTAACC TTACTGCTTC CGGATTTTAT ACTACAGAAA TGGGTGTAAA AGACCTTGGT
TATATAGGAA ATGCACCAAA CCGTTGGGAG GGGGTACCTG CGGATGTTTT AAAACAGTAT
GGCATGGAAG ATGTGTAG
 
Protein sequence
MNRRDSLKAI GLTAISAGMV IEACKPGKEK TSKVEDGAQP GRQAFEIERD KQLNSYKFFN 
DHEMATITVL ADIIIPKDDK SGSASEAKVP DFIEFIVKDI PSHQTPMRGG LKWLDLQCLN
RFQKTFKDAS ASQQIEMVDD IAYPEKVKPG LEQGVAFFTL MRNLTASGFY TTEMGVKDLG
YIGNAPNRWE GVPADVLKQY GMEDV