Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2590 |
Symbol | |
ID | 8253697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3018516 |
End bp | 3019787 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644936240 |
Product | nucleoside recognition domain protein |
Protein accession | YP_003092856 |
Protein GI | 255532484 |
COG category | [R] General function prediction only |
COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.204339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0892212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTAA GCAGAATCTG GTCGGCCTTT ATCATTGTTG CAATTGTAGT AGCAAGTGTA AAGTGCTTCT TTTTTGGACA AAGTGATATT TTTAACTGGA TGGTTATCGG CAAAGCCGAT GATGCCACCA ATCCTTTGAA GTTAGATGGC ATTATACAGA CCTGTTGGGT AGCCGTTGAA CTTTGCCTCA AACTCATTGG GATTCTGGCC TTGTTTATGG GGCTGATGAG CATTGCCGAA AGAGCCGGTG GGATCCGTTT ATTGTCGAGG ATTGTAGGAC CTTTCTTCTC CAAACTTTTT CCTGATATCC CCAAAGGCCA CCCTTCAATG GGGCACATGA TCATGAATTT TTCGGCCAAT TTACTGGGTC TGGACAATGC GGCAACGCCC TTTGGTTTAA AAGCTATGGA AAGTTTACAG GAACTTAATC CGAGTAAAGA TGTAGCCTCA AATTCGCAGA TCATGTTTTT GTGCCTCCAT GCAGCAGGGC TTAACCTTAT ACCGGTTAGT GTAATTGCGA TTCGTGCTTC GCAAAATGCA TCAAATCCTA CAGATATATT TATTCCCTGT TTAATAGTAA CTTTTGTAGG AACAATAGCT GCCATGCTTA TTGTTTCTTT TAAACAAAAG ATCAATATCC TGCAACCGGT AATCATCCTG TGGGTACTTA GTATCTCTTT AGTAATTGCT TTACTGGTAC TTTATATTGT TTCACTGAAT GCTGAGGGTA TAAAATCTTT TTCCGGCATA TTAAGTAATG GTTTAATACT ACTTGTATTT TTACTGATTA TACTTGGAGG GCTTTATAAG AAAATAGATG TTTTTGATGC ATTCATAGAT GGTGCAAAAA ACGGGTTTGA TACGGCTATT AAAATTGTTC CTTACCTGGT TGGAATGCTT GTTGCCATTT CTCTTCTTCG TACCAGTGGT ACTTTTGATG TGGTGATCAG CACAATAAAA AGTGCTTTTG CTTTTTTAGG TGCCGACACC AGATTTGTTG AAGGACTGCC AACTGCATTG ATCCGTCCAT TAAGTGGCGG CGCAGCGAGG GGAATGATGG TAAGTACCAT GGAAACTTAT GGTCCTGATT CATTTGCCAG CAGGCTGTCC GGAATATTCC AGGGGGCTTC AGATACTACC TTTTACATAA TAGCTGTTTA TTTTGGCTCT GTAAGTATTA AAAATACACG ATATGCCATC GGTGCTATGC TTTTAGCAGA TCTGGTGGGT GTTTGTACAG CAATAGGGAT GGCTTATTTA TTTTTTGGCT AA
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Protein sequence | MALSRIWSAF IIVAIVVASV KCFFFGQSDI FNWMVIGKAD DATNPLKLDG IIQTCWVAVE LCLKLIGILA LFMGLMSIAE RAGGIRLLSR IVGPFFSKLF PDIPKGHPSM GHMIMNFSAN LLGLDNAATP FGLKAMESLQ ELNPSKDVAS NSQIMFLCLH AAGLNLIPVS VIAIRASQNA SNPTDIFIPC LIVTFVGTIA AMLIVSFKQK INILQPVIIL WVLSISLVIA LLVLYIVSLN AEGIKSFSGI LSNGLILLVF LLIILGGLYK KIDVFDAFID GAKNGFDTAI KIVPYLVGML VAISLLRTSG TFDVVISTIK SAFAFLGADT RFVEGLPTAL IRPLSGGAAR GMMVSTMETY GPDSFASRLS GIFQGASDTT FYIIAVYFGS VSIKNTRYAI GAMLLADLVG VCTAIGMAYL FFG
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