| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2572 |
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| Symbol | |
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| ID | 8253679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2998600 |
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| End bp | 2999649 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936222 |
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| Product | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase |
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| Protein accession | YP_003092838 |
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| Protein GI | 255532466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.467656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAT CTCAATTTAA GTTTAATTTA CCTGAATCGC TGGTTGCCAA CAACCCTTCT
GAACAAAGAG ACGAAGCCCG TTTAATGGTT TTACACAAGG ATAGCGGAAA AATTGAACAT
AAAATATTTA AAGATGTTTT AGACTATTTC GATGACCAGG ATGTTATGAT CCTGAACAAC
ACTAAAGTTT TCCCTGCCCG TTTATACGGC AATAAGGAAA AGACAGGTGC AACAATTGAA
GTCTTCCTGT TAAGGGAGCT GAACAAAGAA CTTCGTTTAT GGGATGTTTT AGTTGATCCT
GCACGTAAAA TCCGCGTTGG AAATAAACTA TATTTTGGTG ATGACGACCT GCTGGTTGCT
GAAGTGGTTG ACAATACCAC CTCTCGTGGA CGTACCATCC GTTTCTTATT TGATGGCACT
GACGAAGAAT TCAGAAAAAA CATTGAGATA TTGGGCGAAA CACCACTGCC AAAATACATC
AAACGTAAAG CTACTGCACA GGATAAAGAA CGTTACCAAA CTATTTTCGC AAAACATGAA
GGCGCTGTAG CAGCCCCTAC TGCCGGTTTA CACTTTAGCA GGGAACTGAT GAAACGCCTG
GAGTTGAAAG GGATTAACTT TGCGGAGGTG ACACTACACG TTGGTTTAGG TACCTTCAGA
TCTGTAGAAG TTGAAGACCT GACCAAGCAT AAGATGGATT CTGAGCAATT TATTATTGAG
CAGAAAGATG CAGACATTGT TAACAAAGCA ATTGAACGTA AAAAAAGGAT CTGTGCCGTG
GGTACTACTT CAATGCGTGC CATAGAATCG GCTGTTTCTT CAGGCAGGAC CCTTAAGGCT
GCTAACGACT GGACCAGCAA ATTTATCTTC CCTCCTTATG ATTTCAGCAT TGCAAATTCT
ATGATTACCA ATTTCCACAC ACCTGAATCT ACTTTGCTGA TGATGGTAAG TGCATTTGGC
GGCTATGATT ACGTCAGACA TGCTTATGAG GTGGCTTTGA AAGAAAAATA CCGTTTCTAT
AGCTATGGCG ATGCGATGTT GATCATCTGA
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| Protein sequence | MKLSQFKFNL PESLVANNPS EQRDEARLMV LHKDSGKIEH KIFKDVLDYF DDQDVMILNN
TKVFPARLYG NKEKTGATIE VFLLRELNKE LRLWDVLVDP ARKIRVGNKL YFGDDDLLVA
EVVDNTTSRG RTIRFLFDGT DEEFRKNIEI LGETPLPKYI KRKATAQDKE RYQTIFAKHE
GAVAAPTAGL HFSRELMKRL ELKGINFAEV TLHVGLGTFR SVEVEDLTKH KMDSEQFIIE
QKDADIVNKA IERKKRICAV GTTSMRAIES AVSSGRTLKA ANDWTSKFIF PPYDFSIANS
MITNFHTPES TLLMMVSAFG GYDYVRHAYE VALKEKYRFY SYGDAMLII
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