| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2561 |
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| Symbol | |
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| ID | 8253668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2985768 |
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| End bp | 2986766 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644936211 |
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| Product | putative mRNA 3-end processing factor |
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| Protein accession | YP_003092827 |
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| Protein GI | 255532455 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTGA TCAGCTTTAC GAATAAAGGA GTTTACTGCA AACAGGGTGA TTTTTATATC
GACCCATGGC GTCCGGTTAA CCTTGCGGTT ACTACTCATG GCCATTCAGA CCACGTAAAA
TGGGGTAGCA ACGCTTATTT ATGTCACGAG CTGACAAGCC CTATCCTGAA ACAGCGGCTT
GGCGAGCTAA ACATAGAAAC ACTTCCTTAT GGTAAAGAAA TCAGCATCAA CGGGGTTAAA
ATAAGCCTCT TTCCGGCAGG CCATGTAATT GGCTCGGCCC AGGTCAGGCT CGAATATAAA
GGGGAGGTAT GCGTGGTATC CGGCGATTAT AAGGTAACTG ATGATGGCAT CAGTACTGCT
TTCGAACCTG TTAAATGTAA CACCTTTGTA TCTGAAAGCA CATTTGGGCT TCCCATATAC
AAATGGCAGC CGCAGCAGCT GATACTGGAT CAGATCAGGG AATGGATATC CGGCAATCAG
GATAAACAGA AAACCAGCGT ACTGGTTGCT TACAGCTTAG GCAAGGCGCA ACGGCTCGTA
GCCGGACTTG CAGGCTATCG CCCTGTGTAT GTCCACAACT CCATTGCCAA TTTAAATGAT
GCTTTTAAAA CAGCCGGAGT AAATTTGCCG GAAACAATAA GGGTCACCGC TGAAACCAGC
AAAGAGGAAC TCCAAAAAGG AATAGTGATT GTGCCTCCTG CACTTGCAGA AGGGCGCTGG
ATAAAAACCT TAAGCAACGC AGCTACGGGG GTATGCTCGG GCTGGATGCA GGTAAGGGCG
GGCAGAAGAT GGAGAAGTGC CGATGCCGGT TTTGCCTTAA GTGATCATGC CGACTGGCCT
GGCTTATTAT CGGCCATTAA GGCAACTGAA GCAGAAAAAG TGTTTGTAAC GCATGGCTAC
AGTGCTACGT TCGCAAAGTA CCTTAATGAA ATTGGCATTG AAGCGGAAGA AGTAAAAACC
CAATACGGTA ACGAAGATGA CGATGAAGCG TTTCACTAA
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| Protein sequence | MGLISFTNKG VYCKQGDFYI DPWRPVNLAV TTHGHSDHVK WGSNAYLCHE LTSPILKQRL
GELNIETLPY GKEISINGVK ISLFPAGHVI GSAQVRLEYK GEVCVVSGDY KVTDDGISTA
FEPVKCNTFV SESTFGLPIY KWQPQQLILD QIREWISGNQ DKQKTSVLVA YSLGKAQRLV
AGLAGYRPVY VHNSIANLND AFKTAGVNLP ETIRVTAETS KEELQKGIVI VPPALAEGRW
IKTLSNAATG VCSGWMQVRA GRRWRSADAG FALSDHADWP GLLSAIKATE AEKVFVTHGY
SATFAKYLNE IGIEAEEVKT QYGNEDDDEA FH
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