| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2535 |
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| Symbol | alaS |
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| ID | 8253642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2946140 |
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| End bp | 2948842 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936185 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003092801 |
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| Protein GI | 255532429 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTA AGGAAATCAG ACAGGCATAC TTAAAATTTT TTGAATCGAA ACAGCATCAC
ATTGTGGCAT CTGCACCAAT TGTAGTTAAA AATGACCCAA CCCTCATGTT TACCAATGCA
GGGATGAACC AGTTTAAAGA TTTATTTTTA GGAGAGGCGC CCATAAAATA TCCCAGGGTA
ACCGATACGC AGCGCTGTCT GCGTGTTTCA GGTAAGCATA ACGATTTGGA AGAAGTTGGG
ATTGATACCT ATCATCATAC CATGTTCGAG ATGCTTGGCA ACTGGAGCTT TGGAGATTAT
TTTAAAAAAG AAGCCATTGC CTGGAGCTGG GAGCTGCTTA CTGAAGTTTA TAAAATACCA
AAGGATAAAC TTTACGTTTC TATTTTTGAA GGAGATGAAA AGGAAGGCTT ACCAAGAGAT
ACTGAAGCCT ACGAACTTTG GAAACAGTAT GTGCCCGAAG AACGCATTAT TCTTGGCAAT
AAAAAAGACA ATTTCTGGGA GATGGGGGAC ACAGGACCAT GCGGTCCATG CTCTGAGATC
CATGTGGATT GTCGCCCTGA TGATGAGCGT AAGCTTGTTG AAGGTAAAAC TTTGGTAAAT
GCCGATCATC CGCAGGTAAT TGAGATCTGG AATAATGTGT TTATGCAGTT TAACCGCCTT
AAAGATGGTT CATTACAGCT TTTACCGGCA CAGCACGTAG ATACAGGTAT GGGTTTTGAA
CGTCTGGTGA GGGTATTACA AGGCAAGTCT TCTAATTATG ATACGGATGT ATTTCAGCCA
CTGATTCAGT TTATTGCTGC AAAAGCAGGA ATTCAGTATG GTATGAATGA GCAAACAGAC
ATTGCCATGC GGGTAATGGC CGATCATGTC CGTGCAATAG CTTTTGTTAT TGCCGATGGG
CAGCTGCCTT CAAACAATAA GGCCGGTTAT GTGATCCGGC GTATTTTACG CCGTGCTGTA
CGTTATGCCT ATACATTCCT GAACTTAAAA GATCCTTTCC TAAACGAGCT GGTCCCTGTA
CTGGCCGAAC AGTTTAAGGG CGTTTTTGAG GAGCTGGCCT TACAGCAGGA TTTTGTTCAA
AAGGTGATCC TGGAAGAAGA AGTTTCCTTT TTAAGAACTT TAGCTACAGG GATCCAACGC
TTTGATAGCT ACACTAAAAA GCAGGCAGAA TTTCTGATGT CAGAAAATGC CATTGACCCC
GAAAAATCGT TTGAGGACCA ATGGGTACAT AGCATTTTGA AAGACCAGAT GGTTATATCA
GGCGAGTTTG CTTTTGAACT GAACGATACT TATGGTTTTC CGATAGATTT AACGGAGCTG
ATGGCCCGTG AAAAGCGCTG GTCGGTAGAT ATGGAGGAAT ACAATAAAGC CCTGCTTAAA
CAAAAAGAAC GCTCCCGTGC GGCAACTGCT GTAGATACCG GTGACTGGGT ACTGGTTAAT
CCGGACCTGG AAGTGGAGTT TGTAGGCTAC GATGATGCGG AAGCAGAAAC AGAGATCATC
AAGTACCGTA GGGTGAGTGC TAAAGGAAAA GAACAATATC AAATTGTATT GAGCAAAACT
CCGTTCTATG CGGAAAGCGG GGGACAGGTT GGTGATACCG GTCGTCTGGA AGATCACAGT
CGCCTTTTCT TTGTAGAGAT TACAGATACA AAGAAAGAGA ACGGGGTAAT TGTACATTAT
GCAGATACGT TGCCTGAAGA TATTGAAGGA CATTTCTGGG CCGTAATTGA CGAAAATAAA
CGTCTGCTTT CTCAGGACAA CCATACAGCT ACGCATTTGT TGCATGCCGC TTTGAAAAAG
GTATTGGGCA GCCATGTAAA TCAGAAAGGT TCATTGGTAA ACCCTGATTA TCTTCGTTTC
GACTTTTCGC ATTTTGCCCG GGTAACAGAT GAAGAGCTTT CACAGATCGA ACACCTTGTG
AATCAAAAGA TCAGGGAAAA TATTCCATTA AAAGAACAGC GGTATGTACC TTATGATCAG
GCTATCTCCA GTGGTGTAAC AGCGTTGTTT GGTGAAAAAT ATGGAGATTT GGTAAGGATC
ATTACTTTTG ACGACCATTA TTCCAAAGAG CTTTGCGGGG GGACGCATGT ACAGGCTACC
GGACAGATCG GTTATTTTAA GATTATCGCT GAAAGTGCAG TAGCTGCAGG AGTGAGGCGT
ATTGAAGCCA TCACTGCCGA TAAGGCTGAA GCATTTGTAT TGGCACAAAA CAAGGAACTG
AATGAGTTGA GAGAATTGCT GAAAGGCAAT AAAGACCTGA AAGCTGCAGT TGCCGGATTG
ATTGAAGAAA ATAACAGGCT GAAAAAAGAT GCTGAAAAGG CAGTTCTGGA ACAATCTGCA
AATCTGAAGC ACGAAATTGT GCATCACCTT AAAACCATTA ACGGCATTAA CCTGATTGCC
ACACATGTCG ACCTGCCAAA TGCCGATGCG GTTAAAAATC TGGCTTATGC AGTAAAAGAT
ATGGTGGATG ATTTATTTCT GGTATTTACC ACTCTTATTG ATGATAAACC AGGTATCACC
GTCATGTTAT CGGAAAACCT GGTAAAAGAC AGGGGCTTAA ATGCATCCAA TATTGTTAGA
GAACTGGCAA AAGATATTCA GGGCGGCGGT GGTGGTCAGC CTTTTTATGC TACTGCAGGT
GGCAAAAATA AGGAGGGGCT GGCTGGTGTA TTGCACAAGG CCCAGGCTAT GATGACTCAG
TAG
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| Protein sequence | MTAKEIRQAY LKFFESKQHH IVASAPIVVK NDPTLMFTNA GMNQFKDLFL GEAPIKYPRV
TDTQRCLRVS GKHNDLEEVG IDTYHHTMFE MLGNWSFGDY FKKEAIAWSW ELLTEVYKIP
KDKLYVSIFE GDEKEGLPRD TEAYELWKQY VPEERIILGN KKDNFWEMGD TGPCGPCSEI
HVDCRPDDER KLVEGKTLVN ADHPQVIEIW NNVFMQFNRL KDGSLQLLPA QHVDTGMGFE
RLVRVLQGKS SNYDTDVFQP LIQFIAAKAG IQYGMNEQTD IAMRVMADHV RAIAFVIADG
QLPSNNKAGY VIRRILRRAV RYAYTFLNLK DPFLNELVPV LAEQFKGVFE ELALQQDFVQ
KVILEEEVSF LRTLATGIQR FDSYTKKQAE FLMSENAIDP EKSFEDQWVH SILKDQMVIS
GEFAFELNDT YGFPIDLTEL MAREKRWSVD MEEYNKALLK QKERSRAATA VDTGDWVLVN
PDLEVEFVGY DDAEAETEII KYRRVSAKGK EQYQIVLSKT PFYAESGGQV GDTGRLEDHS
RLFFVEITDT KKENGVIVHY ADTLPEDIEG HFWAVIDENK RLLSQDNHTA THLLHAALKK
VLGSHVNQKG SLVNPDYLRF DFSHFARVTD EELSQIEHLV NQKIRENIPL KEQRYVPYDQ
AISSGVTALF GEKYGDLVRI ITFDDHYSKE LCGGTHVQAT GQIGYFKIIA ESAVAAGVRR
IEAITADKAE AFVLAQNKEL NELRELLKGN KDLKAAVAGL IEENNRLKKD AEKAVLEQSA
NLKHEIVHHL KTINGINLIA THVDLPNADA VKNLAYAVKD MVDDLFLVFT TLIDDKPGIT
VMLSENLVKD RGLNASNIVR ELAKDIQGGG GGQPFYATAG GKNKEGLAGV LHKAQAMMTQ
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