| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2524 |
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| Symbol | gatB |
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| ID | 8253631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2927908 |
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| End bp | 2929371 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936174 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_003092790 |
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| Protein GI | 255532418 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.495801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACGA AAACCTCAGT TTCTCCATCA GAATTCGAAT TGGTATCTGG TTTAGAGATC
CACGTACAAC TCAATACACA ATCTAAAATA TTTTCATCCG ATAGTGCAGC TTTCGGAGCA
AAACCCAATG AACACATCTC GGCAGTTTCG CTGGCCCTGC CTGGTGCACT GCCTAAGTTG
AACAGGGAAG TAGTAGCTAA AGCTGCCAGA ATGGGCCTGG CCTTAAACTG TAACATCAAT
CAGGTTAACT ATTTCGACAG AAAGAACTAT TTCTATGCCG ATTTGCCTAA AGGGTATCAG
ATCACTCAGG ACAATAAACC CATCTGTCAG AATGGGTTTA TCAATGTAAC CCTGGGCAGC
GGAGAAGAAA AACGGATCGG TATCAACCGC ATCCATCTGG AAGAAGATGC AGGTAAAAGT
CTGCACGACC AGGATGACAG ATATTCTTAT GTCGACCTGA ACAGGGCTGG TGTACCTTTA
ATTGAAATTG TAACTGAACC CGATATCCGC AGTGCGGAAG AAGCTTCACT TTTGCTTACC
GAGATCAGAA AACTGGTGCG GCACCTGGAT GTGAGTGATG GAAATATGGA AGAAGGAAGC
TTACGCTGTG ATGCCAATAT TTCTATAAGG AAAGTGGGAG CAATTGAATT TGGTACGCGC
TGTGAAGTGA AAAACTTAAA CTCCATAAGA AATGTGCGCA GGGCAATTGA TTTTGAGTTT
GGCCGTCAGA AAGAAGTGGT TTTGAGTGGT GGCAGTATTG TCCAGAGTAC ACTTACTTTT
GATGCAGACA AGGGAACTAC TGCACCCATG AGGAGCAAGG AAGAAGCCAA CGATTACCGT
TATTTTCCTG ACCCGGATCT GGCACCCGTA CACATTTCAG ATGAATGGCT GGCCCAGTTA
AAATTTGATA TGCCTGCATT ACCACAGGAA ATTGCCAAAA AACTGGTAGC AGATTATGGA
GTAAGTACTT CTGAGGCAAC TATGCTTGCT GAAGACCACG ATCTTTTGCA GTATTTTAAC
GATGCATTGG AGTTTGTTAA TAATAAAAAG AATTTGGTAA ACTGGCTTAC AGGACCAATA
AGGGCATTGC TAAATGAAAA AGAGATCGGC ATAGCAGATT TTAAAGTTAT TCCGGAACAG
CTCGCCGATG TGATCAACAT GGTTGATGAT AAGCAAATTA CACAGCAGGT TGCTTTACAA
CAGTTATTGC CCGAATTGCT TAAAGCCCCT GCCGTTAACG TATTGGAACT GGCAGCAAAA
CTGAACCTGC TGATCGTAGA CAACGGCGAT GAACTGTCTG CCTTTGTAGA TGAAGTACTG
ACGAGGTATC AAGCGCAGGT TGAAGCGTAT AAAAAAGGTA AAAAAGGGGT GTTGGGTCTT
TTTGTTGGCG ACGTAATGAA GCTCGCCAAA GGTAAGGCTG ACCCTCAGAA AATAAATCAA
TTGTTACAGG ATAAGTTAAA ATAA
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| Protein sequence | MSTKTSVSPS EFELVSGLEI HVQLNTQSKI FSSDSAAFGA KPNEHISAVS LALPGALPKL
NREVVAKAAR MGLALNCNIN QVNYFDRKNY FYADLPKGYQ ITQDNKPICQ NGFINVTLGS
GEEKRIGINR IHLEEDAGKS LHDQDDRYSY VDLNRAGVPL IEIVTEPDIR SAEEASLLLT
EIRKLVRHLD VSDGNMEEGS LRCDANISIR KVGAIEFGTR CEVKNLNSIR NVRRAIDFEF
GRQKEVVLSG GSIVQSTLTF DADKGTTAPM RSKEEANDYR YFPDPDLAPV HISDEWLAQL
KFDMPALPQE IAKKLVADYG VSTSEATMLA EDHDLLQYFN DALEFVNNKK NLVNWLTGPI
RALLNEKEIG IADFKVIPEQ LADVINMVDD KQITQQVALQ QLLPELLKAP AVNVLELAAK
LNLLIVDNGD ELSAFVDEVL TRYQAQVEAY KKGKKGVLGL FVGDVMKLAK GKADPQKINQ
LLQDKLK
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