Gene Phep_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2508 
Symbol 
ID8253615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2909741 
End bp2911459 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content47% 
IMG OID644936158 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_003092774 
Protein GI255532402 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.647115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTG AATTACTTGG AATTGTTGCT ACTTACCTGC TCACGCTGGT CATAGCTATT 
CCGCTGGGTA AATACCTGGC AAAAGTTTTT GCCGGAGAAA AAGTCTGGAC AGACTTTCTG
AAACCACTCG AAAACGGCAT ATTTAAGCTG TCCGGAATCA ACCCCAAAGA AGAGATGAAC
TGGAAGCAGC ACATGAAAGC ACTGCTTACC ATTAACCTGG TTTGGCTGGT ATACGGTTTT
TTTGTACTGA TATACCAGGA TAAACTACCC CTGAACCCTG ATGGTAATCC CGGTATGACG
GCAGATCTGT CTTTCAATAC CATTATCAGT TTTGTCGTAA ACTGTAACCT GCAACATTAT
TCCGGAGAAT CTGGGGTAAG TTACCTCACC CAGCATTATG TACTCATGTT TTTACAGTTT
GTAAGCTGTG CAACCGGTAT AGCTGCTGCG GTCGTGTTTT TTAAAGCTTT CAGAGATAAA
ACTTCGGTTA AACTGGGCAA CTTCTGGGAT TTCTTTGTAA AATCAATTAC CCGTTTGTTA
TTGCCCCTGT CTTTAATTAT GGCCCTTATC CTGGCTTTTA ATGGCACACC AACCAGTTAC
GAAGGTAAAG ACCAGTTTAT CTCCCTGCAG GGTGATACCG TAAATGTATC CCGTGGCCCG
GCCGCCGGCT TTATTGCCAT AAAACACCTG GGTACCAATG GTGGAGGCTG GTTTGGTGCC
AATTCTTCAC ACCCTTTGGA AAATCCAAAT TACCTGACCG CTATGGTCGA ACTGATTGCC
CAGGTGATCA TCCCCATCGC CATGGTCATT GCCTTCGGTT ACTTCATCAG GCGTAAAAAA
CTGGCCTGGA TGATCTTCGG GGTAATGACC ATAGGCATGC TGCTCCTGCT GGTCCCTACG
CTGAGCAGCG AACTGGGGGG TAATCCGGCA ATTGCAAAAA TGGGTATTTC GCAGGCTACA
GGCGCCATGG AGGGTAAAGA GGTACGTTTT GGTCCAGCCA TATCTGCTTA CTGGAGTACA
GTAACCACCA TCATCTCTAC CGGTTCGGTA AACAGCATGC ACGACAGCAC CATGCCTTTA
ACAGGAACCT GGCAATTGCT GGGCATGATG ATCAACTCCT TTTACGGGGG CTGTGGAGTA
GGGATGTTGA ATTACTTTAT TTACCTGATC ATCGCTGTAT TTATTTCCGG ACTGATGGTG
GGCCGTACAC CAGAGTTTCT TGGGCATAAG GTAGAGGCCA GGGAAATCAA GATAGCGGCG
CTGATCACGT TGTTAAGCCC TTTTTTGATT TTGGCTGGTA CCGCTATAGC CAGTTATGTC
TTTACAAACC ATGGGGATGC GGCCTGGGCC GTACAGCCCA AAAACTGGCT GAACAATCCC
GGCTTTCATG GCTTCTCTGA AATGTTATAT GAAATGACCT CCTCCAATGC CAACAATGGC
TCGGGCTTTG AAGGGCTGGG CGACAACAAT GTATTCTGGA ACGTGGCCAC AGGTTTCGTA
TTGATACTTG GTCGTTTCCT GCCCATAATT GGTCCGGTGG CTATTGCCGG TTTACTAGGT
GCCAAAAAAT ACATCCCCGA ATCGGCTGGT ACGCTAAAAA CAGATACGCT GACTTTCAGC
CTGATGACCT TTGCAGTAAT CCTGGTGTTA AATGCACTTT CTTATTTCCC TGCACTGGCC
TTAGGCCCCC TGGCAGAATA TTTTACGATG CTTAAATAG
 
Protein sequence
MNTELLGIVA TYLLTLVIAI PLGKYLAKVF AGEKVWTDFL KPLENGIFKL SGINPKEEMN 
WKQHMKALLT INLVWLVYGF FVLIYQDKLP LNPDGNPGMT ADLSFNTIIS FVVNCNLQHY
SGESGVSYLT QHYVLMFLQF VSCATGIAAA VVFFKAFRDK TSVKLGNFWD FFVKSITRLL
LPLSLIMALI LAFNGTPTSY EGKDQFISLQ GDTVNVSRGP AAGFIAIKHL GTNGGGWFGA
NSSHPLENPN YLTAMVELIA QVIIPIAMVI AFGYFIRRKK LAWMIFGVMT IGMLLLLVPT
LSSELGGNPA IAKMGISQAT GAMEGKEVRF GPAISAYWST VTTIISTGSV NSMHDSTMPL
TGTWQLLGMM INSFYGGCGV GMLNYFIYLI IAVFISGLMV GRTPEFLGHK VEAREIKIAA
LITLLSPFLI LAGTAIASYV FTNHGDAAWA VQPKNWLNNP GFHGFSEMLY EMTSSNANNG
SGFEGLGDNN VFWNVATGFV LILGRFLPII GPVAIAGLLG AKKYIPESAG TLKTDTLTFS
LMTFAVILVL NALSYFPALA LGPLAEYFTM LK