Gene Phep_2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2507 
Symbol 
ID8253614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2907700 
End bp2909730 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content47% 
IMG OID644936157 
ProductK+-transporting ATPase, B subunit 
Protein accessionYP_003092773 
Protein GI255532401 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.37111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.852149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTT CTCATAAATT ATTTGAACCT GCTTTAGTGC AAACTGCATT TAAACAGTCT 
TTTATTAAAC TCGACCCAAG GGTGATGGTC CGTAACCCTG TCATGTTCAC GGTCGAGATC
GGTACGGCCA TTATGGCCTA TGTTACCATT TATTCAATGA ACAACCCCGG ACAGGGATCG
GCCGTATACA ACTTCTTTAT TTTCCTGATC TTATTGCTTA CCGTACTTTT TGCCAACTTT
GCCGAGGCCA TTGCCGAAGC CCGCGGAAAA GCTCAGGCCG ACAGTTTAAG GAAAACCAGG
GAAGAAACAC CGGCCAAAGT ATTGCTGAGC AATGGAAAGG TTGAGGTGCG CTCTTCAAAC
CTGCTCAAAA AAGGGGATGT ATTTATCTGC GAAGCAGGCG ATACCATCCC CACCGATGGC
GAGATCATTG AAGGTATAGC TACAATTGAT GAATCGGCCA TTACAGGTGA ATCAGCCCCC
GTTATCCGCG AATCGGGTGG CGACAAATCA TCCGTAACCG GTGGTACAAA AGTGCTTTCT
GATGAGATCA AAGTACAGGT AAGCACTCAG CCTGGCGAGA GCTTTCTGGA TAAGATGATC
GCCCTGGTAG AAGGTGCATC CCGTCAGAAA ACACCCAATG AAATTGCTTT GACCATTTTG
CTGGCCAGTT TTACCCTGGT TTTCATCATC GTATGCGTAA CCTTAAAGCC TTTTGCCGAT
TATGCAAATA CGCCGATCAC TATAGCAGCC CTGATCTCCC TGTTTGTATG TCTGATCCCT
ACAACCATTG GCGGGCTCCT TTCTGCCATT GGCATTGCGG GGATGGATAG GGCATTAAGG
ACCAATGTGA TCACCAAATC GGGCAAGGCA GTTGAAACTG CTGGCGACAT AGATGTCCTC
CTCTTAGATA AAACCGGAAC CATTACCATA GGTAATCGTA AGGCCACAAA TTTTTACCCT
ACCACCGGGA TAGTGATCAA AAACTTCATG GATGCCTGTG TGCTGAGCTC ACTGGCAGAT
GATACGCCTG AAGGAAAATC TATAGTAGAG CTTGCGGCTT TACAGGACAG CCATAGTCAT
GCTGTTGCAC CTGAAGGAGC AAAATTTATC AAATTTACTG CCGAAACACG TTCGAGCGGT
ATTGATACCC CTGATGGAAA ACGCATCCGG AAAGGGGCAT TTGACGCTAT CCGTAACATC
GTGTTGATGG CCGGAAACCC TTTTCCAATG GATATTGAAG ACCAGGTTAA AGCTATAGCC
AACAATGGTG GTACCCCATT GGTAGTTGCC GAAAATGAAA AAGCCATCGG AGTAATCGAA
CTGCAGGATA TCATTAAGCC CGGCATCAGT GAACGTTTTG AACGCTTGCG CAAGATGGGG
GTGAAAACCG TAATGGTAAC CGGTGATAAT CCCTTAACCG CTAAGTTCAT CGCCGAAAAA
GCAGGGGTTG ATGATTTTAT TGCCGAAGCC AAGCCGGAAG ATAAAATGAA CTATATCAAA
GAGGAGCAGG CACTGGGTAA ACTGGTAGCC ATGATGGGTG ATGGTACCAA TGATGCCCCC
GCTTTGGCAC AGGCCGATGT AGGCGTGGCC ATGAACAGTG GTACGCAGGC AGCTAAAGAA
GCCGGTAATA TGGTCGACCT GGACAATGAC CCTACCAAAC TGATCGAGAT CGTAGAGATC
GGCAAACAAC TGCTGATTAC CCGTGGCACG CTAACCACCT TCTCTATCGC AAACGATGTG
GCCAAATATT TTGCCATTGT ACCGGCCCTG TTTATTGCTT CCATCCCTGC TTTACAGCAT
TTGAATATCA TGGGGCTACA CAGTCCTGAA AGTGCAATTT TATCGGCCGT AATTTTTAAT
GCCATCATCA TTCCTTTCCT CATTCCCCTG GCCTTAAAAG GTGTTGCCTA TAAACCCATA
GGTGCCAGCG CCTTGCTGCG CAGAAACCTG TTTATATATG GGTTAGGAGG GGTAATTGCA
CCTTTCATCG GCATAAAATT AATTGACCTG ATGGTAGGAT TATTTATTTA A
 
Protein sequence
MKTSHKLFEP ALVQTAFKQS FIKLDPRVMV RNPVMFTVEI GTAIMAYVTI YSMNNPGQGS 
AVYNFFIFLI LLLTVLFANF AEAIAEARGK AQADSLRKTR EETPAKVLLS NGKVEVRSSN
LLKKGDVFIC EAGDTIPTDG EIIEGIATID ESAITGESAP VIRESGGDKS SVTGGTKVLS
DEIKVQVSTQ PGESFLDKMI ALVEGASRQK TPNEIALTIL LASFTLVFII VCVTLKPFAD
YANTPITIAA LISLFVCLIP TTIGGLLSAI GIAGMDRALR TNVITKSGKA VETAGDIDVL
LLDKTGTITI GNRKATNFYP TTGIVIKNFM DACVLSSLAD DTPEGKSIVE LAALQDSHSH
AVAPEGAKFI KFTAETRSSG IDTPDGKRIR KGAFDAIRNI VLMAGNPFPM DIEDQVKAIA
NNGGTPLVVA ENEKAIGVIE LQDIIKPGIS ERFERLRKMG VKTVMVTGDN PLTAKFIAEK
AGVDDFIAEA KPEDKMNYIK EEQALGKLVA MMGDGTNDAP ALAQADVGVA MNSGTQAAKE
AGNMVDLDND PTKLIEIVEI GKQLLITRGT LTTFSIANDV AKYFAIVPAL FIASIPALQH
LNIMGLHSPE SAILSAVIFN AIIIPFLIPL ALKGVAYKPI GASALLRRNL FIYGLGGVIA
PFIGIKLIDL MVGLFI