| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2493 |
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| Symbol | |
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| ID | 8253600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2891965 |
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| End bp | 2893149 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936143 |
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| Product | PAS sensor protein |
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| Protein accession | YP_003092759 |
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| Protein GI | 255532387 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0714891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00496497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAGCAAG TCCGATTATT AGAAGCCATT ATTGAAACGG CCATTGATGG TATCATTACC
ATCGACAACA GGGGGCATAT CGAAAGCCTT AACCCTGCTG CGCTTAAACT TTTTGGTTAT
ACCCTGGAAG AAGTGAAAGG CCGGAACATC AATATGCTGA TGCCCGAACC GGATAAAAGC
GGCCACGATG GTTATCTGCA CAGGTACCAG ACTACTCGTG AAAAACGTAT CATTGGCAAA
GGACGTGAAG TAAGGGGGCT GAGAAAAAAT GGAAGCACTT TTCCTTTTCG TCTGGCCGTA
AGTGAGGTGC AATACGACGA CCGGATCATT TATACAGGTT TTATACATGA TCTTTCCAAA
GAAAAAGAAG CCGAAGAACG CCTGCGTGAA TATGCGGCCG AACTGGAAGA ACTGGTAGAA
GAACGGACCA AATCCTTAAG AAAAACAGTG CGGGCCCTAA GCGAAGCCAA AGAAGAGGTG
AGCCTCTCAC TGGAAAAAGA AAAAGAGCTG AACCAGATGA AAAGCAGGTT TGTATCTATG
GCCTCTCATG AATTCAGGAC ACCACTGAGC TCTGTACAGC TTTCTTCTTC TCTTATTGAA
AAATATGCCC AGCCCTTTAA CAACAAGAAC ATCATCAAGC ATGTGGGTAA AATCAAAAAT
GCAGTAGGAA ATTTAACGAC CATTCTAAAT GATTTTTTAT CGCTCGAAAG GCTGGAGGCC
GGTATCGTTG AACCGGCTTT TATTTCTTTT GACCTGGTCA AACTGGCAGA AGAAGTAACG
GAAGAGATGC AGATGATCGC CAAACAGGAA CAGCACATCA TTTATCAGCA TACGGGACTG
GAAAGTGTGA CCGAGCTCGA TCAGAACCTG ATCAGGAACT GTATGATCAA CCTGATCTCC
AATTCCATCA AATATTCCGG TGAACATACC TTTATAGAAT TTAATACAGA GATCAACGAA
CATGAATGTA CCATCATGGT AAAAGACAAT GGTATCGGTA TCCCCGAAGC TGACCAGAAA
CATCTGTTCC AGCCTTTTTT CAGGGCAAAC AATACAGGAA ATATCCCCGG TACGGGCCTG
GGCTTAAATA TTGTACTCCG GTACGCCACA CTTATGAACG GCAGGCTCCA TTTCGAAAGT
GTCGTCAATA AAGAAACCAC CTTTAAACTT TCCTTTAACA GATGA
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| Protein sequence | MEQVRLLEAI IETAIDGIIT IDNRGHIESL NPAALKLFGY TLEEVKGRNI NMLMPEPDKS
GHDGYLHRYQ TTREKRIIGK GREVRGLRKN GSTFPFRLAV SEVQYDDRII YTGFIHDLSK
EKEAEERLRE YAAELEELVE ERTKSLRKTV RALSEAKEEV SLSLEKEKEL NQMKSRFVSM
ASHEFRTPLS SVQLSSSLIE KYAQPFNNKN IIKHVGKIKN AVGNLTTILN DFLSLERLEA
GIVEPAFISF DLVKLAEEVT EEMQMIAKQE QHIIYQHTGL ESVTELDQNL IRNCMINLIS
NSIKYSGEHT FIEFNTEINE HECTIMVKDN GIGIPEADQK HLFQPFFRAN NTGNIPGTGL
GLNIVLRYAT LMNGRLHFES VVNKETTFKL SFNR
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