Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2438 |
Symbol | |
ID | 8253545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2831679 |
End bp | 2834267 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936088 |
Product | protein of unknown function DUF470 |
Protein accession | YP_003092704 |
Protein GI | 255532332 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.298386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAG CCAGGTTATA CCTCTCGAGA TTGGTTTACA ACAAGTTTTT TTGGCAGTTG TTTCTGGCAA TTTTTATGAT TGCTATGGCG ATCTTTTTTA TCCGGCAGGA ACACATTGAG GTGGTAAAGA TCAAGGCGGA GCTGGAACGC AGCCAACCTG TCTACATTGT TTTGGGATTG GTGCTGACTG TAGTTTATAT CCTTGCTCAG GGACTGATGT ATGTGTACAG TTTTAAAGCT TTAAACAAAT CGATTTCGCT GGCGCTGGCC ATTAAATTGT TTCTTAAAAG AAACCTGGTG AGTGTTTTTT TACCGGCGGG TGGTTTTTCA TCACTGGTGT TTTTTACGAA AGAGATAGAG GAGAAGGGGG TAGGCAAATC ACAGATTCAT CTGGCCTCTA CTTTATTTGG TTTTTGCAGT ATCCTTTCGG TAGTTATAGT AGCGGTCCCG GTTTTGGCCA TCGCCCTGTT GTTTACCAGG TTAGGGAATG CCGAATTGCT GGGCTTTGTT TTTCTGTTGT TGCTTACGGC AGGTTTTATT TTACTTGTTT ATTCTATTTC TGTAAAAGGC CGTGCCTATC GCTGGCTTTC CAGGATGCGG CCCTCGCTGT CTACCGTTCT GGATGACATG ATCAATGAAA AGATCAACAG AAAACAATTC TGGATAACTT TACTGATCTC TGTTGGCATA GAGGTGATTG GTATTGTACA CCTGTACATT TCTATGCTGG CCCTTGGCTT TGATGCCAGC TGGCCGGCAG CCATTATAGG TTATATCGTG ATGGTAATCC TGCTGATCGC ATCGCCTTTT TTAAGGGGAC TGGGAGCAAT AGAATTGTCG CTGACCTTTG TTTTACAGCA GTTTGGCTTT CCGGTGCTTG CTGCTGCAAC CATTACCCTG CTGTTCAGGT TTTTTGAATT CTGGATTCCG CTGCTGGCGG GCATTATAAG TTTTATCACC AAAAAGGATA ACCTCATCCT GCGGATACTA CCGGCATGCA TTATCCTGGT GCTGGGCATT GTAAACATCA TTTCGGCAAT TACACCAGCT ATACCTACCC GTTTAAGGAT GGTAAAAGAC CTGCTGCCAG AAGATCTGAT CATTACCAGT AATTCACTGG TGCTGGTTTT TGGCTTGATA CTGGTTATCA TCAGCATATT TTTGTTACAG GGTTCCAGAC GAGCCTGGTA TACGGCTTTG TTTCTGACTG TTTTTTCAGT TATCGGGCAC CTGTTTAAGG CAGCGGATTA CGAGGAAGCC TTACTGGCCT TTATTGCTGC TTCGGCTTTA TGGTATACCA GAAGCTCCTA TAAGCTTAAG CCCAATGCCA AACTGGTTTC CATCAATTAC CTGGTGTTGC TGTACGCAGT ACTTGCCCTG CTTGCTTATG GGGTACTGGG CTTTTATTTC ATAGACAAAA GACATTTTGG GATTGACTTT CATTTTATGC AGGCGCTGAA AGCAGTTTTA AAGTTGTTTT TTCTGATCGA TTATCATGGA ATGACACCTT TGACCAGGTT TGGTGAGCGC TTTCAGGATT CCATCTATAT CTCGGGGGCT GCAGTGATCC TTTTTGTAGT TTTCAGTTTA CTGAGGCCTT ATTTTTCCAA GCCCTATAAT TCTGAGCAGG ATTTTGACCT GGCGAGGCAG TTGCTGCAGC AATACGGTTC TTCTGCACTG GATTATTTTA AAGTATACCC CGATAAATTT TTATTCTTTA AGCCCGACAA AACGGCTTTT ATCAGCTTTA AGGTGACACG GCATTTTGCC ATTGTGCTGG AAGATCCCGT TGCAGGTACT GAGACGGCGC AACAGGAAAT GATCGGGCTG TTTGAAGATT TCTGTGCCCA GAATGGTTTT ATAAGTGCCT ATTACCGCGT GCCTGAAAAA TCTTTACAGC TGTATACTGC TGCAGGATAT AAATTTATCC CTATAGGAGA AGAAGCTGTT CTGGACTTGA CTGGTTTTAC ACTTGATGGT GGCAAGATGA AAACCACCAG GAGTGCCATC AGCAGGCTTA CTGCCGAAGG CTATTGTTTA AAAGTTTACC AGGAACCGAT TAAGGAGGGC CTGTTGCAAA AGCTTGAAAA GGTATCGGAC AACTGGCTGG CGGAGCTGCA CCAAAAGGAA GTTGCTTTTA CCCAGGGTGT TTTTGATACC AGTATTTTAA AAACGCAGAC GATCATTACC GTAGAGGATG AAGAAGAGAA GGTTTATGCA TTTTTGAACC TGGTACCGGA TTATGCGCCG GGTGAGGCTA CCTACGATCT GATCAGGAAG GTCAGCGATG CACCCAACGG CGTGCTGGAT ATGCTGCTGG CCAAAACTTT TATTTATTTA AAAGAGCAGG GTTATACCAG TGTCAATATG GGACTGGCAC CTTTATCGGG AATGGAAGAG GTAAACATTA CCCAGAAAAC AATTAAGTAT GCCTACGAGA ATTTTAAAGT ATTCGGGCAG TTTAAGGGTT TAAGAAAATA CAAGGAGAAG TTTTATCCCA ACTGGGAAAA GAAATATTTG ATTTACAGTC ATAATTACCA TTTGTTGCAG GTGCCATCGG CCCTGAGACG TGTTTCTGAA GGCAGTTAA
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Protein sequence | MNKARLYLSR LVYNKFFWQL FLAIFMIAMA IFFIRQEHIE VVKIKAELER SQPVYIVLGL VLTVVYILAQ GLMYVYSFKA LNKSISLALA IKLFLKRNLV SVFLPAGGFS SLVFFTKEIE EKGVGKSQIH LASTLFGFCS ILSVVIVAVP VLAIALLFTR LGNAELLGFV FLLLLTAGFI LLVYSISVKG RAYRWLSRMR PSLSTVLDDM INEKINRKQF WITLLISVGI EVIGIVHLYI SMLALGFDAS WPAAIIGYIV MVILLIASPF LRGLGAIELS LTFVLQQFGF PVLAAATITL LFRFFEFWIP LLAGIISFIT KKDNLILRIL PACIILVLGI VNIISAITPA IPTRLRMVKD LLPEDLIITS NSLVLVFGLI LVIISIFLLQ GSRRAWYTAL FLTVFSVIGH LFKAADYEEA LLAFIAASAL WYTRSSYKLK PNAKLVSINY LVLLYAVLAL LAYGVLGFYF IDKRHFGIDF HFMQALKAVL KLFFLIDYHG MTPLTRFGER FQDSIYISGA AVILFVVFSL LRPYFSKPYN SEQDFDLARQ LLQQYGSSAL DYFKVYPDKF LFFKPDKTAF ISFKVTRHFA IVLEDPVAGT ETAQQEMIGL FEDFCAQNGF ISAYYRVPEK SLQLYTAAGY KFIPIGEEAV LDLTGFTLDG GKMKTTRSAI SRLTAEGYCL KVYQEPIKEG LLQKLEKVSD NWLAELHQKE VAFTQGVFDT SILKTQTIIT VEDEEEKVYA FLNLVPDYAP GEATYDLIRK VSDAPNGVLD MLLAKTFIYL KEQGYTSVNM GLAPLSGMEE VNITQKTIKY AYENFKVFGQ FKGLRKYKEK FYPNWEKKYL IYSHNYHLLQ VPSALRRVSE GS
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