| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2429 |
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| Symbol | |
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| ID | 8253536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2824003 |
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| End bp | 2825220 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936079 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003092695 |
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| Protein GI | 255532323 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00087995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAGTA CAAAAGTTTT AACACAACAA CACCAGGGCA TAGCAACCCT GCTTGCATTT
GCCCTGTTAC CACTATCCGG CTTTGCAACT GATATCTATA TCCCTTCTTT ACCCACAATG
GCCTCCACAT TACAGGTAAG CAGTCTGCAG GTCCAGCTTA CGCTAAGTCT TTTTCTCATC
AGCTATGGCA TCTCCCAGCT ATTTATCGGC AGTGTGCTCG ACAGCTTTGG CCGGTACCGT
TTAAGCCTCA TCTGCCTGCT CATCTTCGCC GCGGCCAGCA TCGTCATTGC CAATACGCAT
AACATCTACC TCATTTATCT GATGCGCATC ATACATGGTT TTACGGTAGG AACCATTATT
GTAGCGAAAA GGGCATATTT TGTCGACTTG TTTACCGGCG ATCAGCTGAA ACACTATTTA
AGTCTCTTTT CCATTATCTG GTCTACAGGT CCCATTGTCG CCCCGTTTAT AGGCGGCTAC
CTGCAAACCG CTTTTGGCTG GGAATCCAAT TTTTACTTCC TGGCTTTACT GGCCATTGTG
CTGGCCGTTC TGGAGTATAT TTACAGCGGC GAAACGCTGA GCCATTTTTC GGCTTTTTCC
TTAAAAAAGA TTACCGGCAT CTATATCACC ATGATCAAAA CCGCAAGCTT TAGCCTGGGC
ATCGTGATGC TGGGCCTTGC TTATACCATG GTGATGATCT ACAACATGAC AGGCCCCTTT
ATCGTAGAAC ACCACTTACA TTTTACACCT GTTGTTGCGG GTTACAGCTC ACTCATCCTG
GGCTTTGCCT GGATGGTAGG CGGATTCATA GGTAAGGCAA CCATTAACAG GCCCTTCTTC
AAAAAGATGG CCACCAACCT GATATTTCAG GTGATATTTG TATCAACCAT GCTGCTCAGC
ATACAGTTCA TTTCCAGTCT GTATACCTTA ATCCTGTTCG CATTCCTCAT CCATGTAACC
GCCGGTTACA TCTTTAACAA TTATTTCACT TTCTGCCTCG GGTTGTTCCC TAAAAACGCT
GGAATTGCCA GTGGTTTAAC CGGTGGCATC ACTTATGTAA TTGTATCTTT TTTAAGCTAT
AGCATCATTG CCATTTTACC GGCAAAAGAC GAGCATCACC TCGGAGCCAG TTACCTGGTA
CTGACCATAC TCTCTGCCCT GGTCATGTTT ACCATTTACA GTAGGCATAA AAAAGCCGGT
ACTCAGGTAA CAGAATGA
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| Protein sequence | MSSTKVLTQQ HQGIATLLAF ALLPLSGFAT DIYIPSLPTM ASTLQVSSLQ VQLTLSLFLI
SYGISQLFIG SVLDSFGRYR LSLICLLIFA AASIVIANTH NIYLIYLMRI IHGFTVGTII
VAKRAYFVDL FTGDQLKHYL SLFSIIWSTG PIVAPFIGGY LQTAFGWESN FYFLALLAIV
LAVLEYIYSG ETLSHFSAFS LKKITGIYIT MIKTASFSLG IVMLGLAYTM VMIYNMTGPF
IVEHHLHFTP VVAGYSSLIL GFAWMVGGFI GKATINRPFF KKMATNLIFQ VIFVSTMLLS
IQFISSLYTL ILFAFLIHVT AGYIFNNYFT FCLGLFPKNA GIASGLTGGI TYVIVSFLSY
SIIAILPAKD EHHLGASYLV LTILSALVMF TIYSRHKKAG TQVTE
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