| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2428 |
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| Symbol | |
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| ID | 8253535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2823423 |
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| End bp | 2823848 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936078 |
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| Product | protein of unknown function DUF1486 |
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| Protein accession | YP_003092694 |
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| Protein GI | 255532322 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3631] Ketosteroid isomerase-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000117407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGCAT TCTTAACTAC CCAAACAAAA AGCATTGTCC GTCAGTTTTA TGAGGCTTTG
GCCAATCGTG AACTCGAAAA ATTGTTACTT CTTTTTTCAA CAGAGCCAGA CTGGGATGTA
CCAGGTAATC AGGAACTGGC CCCATGGCTG GGGAAGAGAA GTAACCGTAA AGAAATACGT
GATTTTTTTG TATTGCTGTG GGAAAACATT GAGCCGGTGA GTGCGGATAT TGACCATATT
CTGGCTGAAG GAGATTTTGC TGTGGTTACA GGCTCGTTCA GTTCTGTAAT GTTAAGGACC
GGGGAAGTTT ATGCCTCCAT GTTTTCTGCA CATTTTACAG TTGCTGATGG GCAGATTGTT
CGTTACCGGC TACAGGAAGA TAGTTATGGC CTGGTTGAGG CCCTGAGTTT ACCAAAGCCA
GTATAG
|
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| Protein sequence | MSAFLTTQTK SIVRQFYEAL ANRELEKLLL LFSTEPDWDV PGNQELAPWL GKRSNRKEIR
DFFVLLWENI EPVSADIDHI LAEGDFAVVT GSFSSVMLRT GEVYASMFSA HFTVADGQIV
RYRLQEDSYG LVEALSLPKP V
|
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