| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2362 |
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| Symbol | cysM |
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| ID | 8253469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2758480 |
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| End bp | 2759352 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936012 |
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| Product | cysteine synthase B |
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| Protein accession | YP_003092628 |
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| Protein GI | 255532256 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.688309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.140538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAAATA TTGTAGAATT TGTGGGGAAT ACACCCCTTG TAGAGATCAG TAAATTGAAT
CCAAACCCTG ATGTAAGGAT ATTTGCAAAG CTTGAAGGAA ATAATCCGGG TGGAAGTGTA
AAAGACAGGG CCGCATTAAA CATGATCCGC AGTGCAATGG AACGTGGCGA AATTAAAAAA
GGAACAAAGT TAATTGAAGC AACAAGTGGG AATACAGGTA TAGCACTGGC CATGATTGCC
AGTATTTATG ACCTGGAGAT TGAGCTGGTT ATGCCGGCAA GCTCTACCCG TGAACGGACA
TTGACTATGG AAGCTTTTGG GGCTAAAGTA ACTTTATTAG AATCTATAGA GGTATGCCGC
GACTATGCGG AAGAACAGCG CGATAAGAAC GGCTACTTTT TACTGGACCA GTTTGCCAAT
CCCGATAATT ATCTGGCCCA TTATAAAACT ACCGGACCGG AAATCTGGCG CGATACCAAT
CAGCAGATTA CCCACTTTGT AAGTTCTATG GGTACTACCG GCAGTATTAT GGGCAATTCT
ATGTTTTTAA AGGAACAGAA TCCCAATATA CAGATTATTG GTTGTCAGCC AACTGAAGAA
TCTTCTATAC CGGGCATCAG GCGCTGGCCG GCTGCTTATC TGCCAAAAAT ATTTGATGCA
AGCAGGGTAG ACCGCATAAT GGATGTTTCA CAGCAGGAAG CTACAGAGAA GGCACGTGAA
CTGGCCAGAG TTGAAGGGAT TTTTGCCGGA ATGAGCAGCG GAGGAGCACT GGCCTGTTCA
TTGAACTTGG CAAATGAACT GAAATCGGGC ATGATTGTAT TTATTGCTTG TGACCGTGGT
GACAGATATT TGAGCAGCGA CTTGTTTGGA TAG
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| Protein sequence | MGNIVEFVGN TPLVEISKLN PNPDVRIFAK LEGNNPGGSV KDRAALNMIR SAMERGEIKK
GTKLIEATSG NTGIALAMIA SIYDLEIELV MPASSTRERT LTMEAFGAKV TLLESIEVCR
DYAEEQRDKN GYFLLDQFAN PDNYLAHYKT TGPEIWRDTN QQITHFVSSM GTTGSIMGNS
MFLKEQNPNI QIIGCQPTEE SSIPGIRRWP AAYLPKIFDA SRVDRIMDVS QQEATEKARE
LARVEGIFAG MSSGGALACS LNLANELKSG MIVFIACDRG DRYLSSDLFG
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