Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2282 |
Symbol | |
ID | 8253388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2650683 |
End bp | 2652305 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644935931 |
Product | RagB/SusD domain protein |
Protein accession | YP_003092548 |
Protein GI | 255532176 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00108991 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAAAAA TAATTCTTTT AAGTTTTTTG GCAATTATAT GCTCAACAAC TGGTTGCAAG AAATTTTTAG ATAAAGTACC CTCATCATTT GTTGCCCCCG AAAATTATTT TAATAATGAA AAAGAAGTAA ATACTGCATT GAACGGAGTG TATGATATTT TAAGCCGGGA GCAGACATTT GGCGGACAAT TGCCCATTCG CCATGCAGTC AGTACAGATG AGTCATTCTT CTCTTATGCT TCCTTTCCAA CCGGACCTTT CTATTATAAT TTTGGTGCCG ATGATGCTAC GATACGGGAT CTATGGAGAT ACCTGTATGA TGGCATAGAA CGGGCAAACG TTTTACTGGC CAATCTGGAT AAAGCAAATA TGGACGAGGG CAAAAAATCT GTTGTTAAAG GTGAAACTCT CTTTCTGCGG GCCTTTTATT ATTTTATCCT GGTACAGAAT TGGGGTGGTG TACCTTTAAA GCTGACACCA ACCACCTCTA TAAACAATGT TAATATTCCA CGTAATTCTG TTAAGGAGGT TTATGATCAG ATTCTAAAAG ATATGGTTGA AGCGGAAGGA TTGGTCAAAA AGATTTCTGA TATCGGTTTC GGAGGAAGGG TCTCTAAATC CGCTGTACGT GGTATTTTGG CCAGAGTGTG CCTTAACATG GCTGGTTATC CCTTAAATGA CGTTGCTAAA TTTAAAGATG CTGCTACATG GGCTGCAAAA GTGAATGAAT ATGGAGAACA TGCTTTAAAT CCAGATTACA GCCAGGTTTT TATAAACCTT TGTAAAGATC AGTACGATAT AAAGGAAAGC ATTTTTGAAG CTGAATTATA CGGATCAAAT AGTGACGCTT TTAGAGAAGG TGGACGGATC GGCAACGAGA ACGGTGTGAA ATGCTCTGCA TCTACAGATT TGATCCCTAC AGTTGGTTTT GCTTACGGCT TTGTAAGCAC AACCAGAAAG CTATACACGT CTTATGAATA TAATGCCACT GATGCATCTA AACGTGACCT TAGAAGAGAT TGGGCAATAG CTACCTATAC ATTAAATGCA TCCGGTGTAA AGGCGAATAT TGCCGCTACC AATATTTATG CAAGAAATTG TGCTAAATGG CGCCGTGAAT ACGAAGTGGT AACACCTAAA AATAAAAACT ATACGTCAAC CAATTTCCAG ATACTCAGAT ATGCTGATGT ATTACTGATG CTGGCCGAAG CAGAAAATGA AGTAAATAAC GGGCCAAATG CCACTGCGGT TAATGCCCTT AACGAAGTAA GAAGACGTGG TTACGGCAAA TTATTAGCAG GGGCAACCAA TCCGGCTAAT GCCGATTATC CGGGGGCAAT TTCACTAAGT AAAGCTGCAT TTTTAAAAGT GATACAGGAT GAAAGGGCAC GTGAACTGTG TTTTGAAGGT TTACGCAAGT CTGATCTGAT CAGGTGGGGA ATATTTGTAA ATACCATGCA AGCCACCGCT ACCGAGTTTA CTACTTATGC TGCCATGACC ACTACCATTT ATAAAAATGC AAGGGATGCT GCACAAAGGG TTACTGCAAC ACATTTGTTG TACCCAATTC CAATTCTGGA AATGTCGTTA AACAAAGCTA TGGTACAAAA TGAAGGATAT TAA
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Protein sequence | MKKIILLSFL AIICSTTGCK KFLDKVPSSF VAPENYFNNE KEVNTALNGV YDILSREQTF GGQLPIRHAV STDESFFSYA SFPTGPFYYN FGADDATIRD LWRYLYDGIE RANVLLANLD KANMDEGKKS VVKGETLFLR AFYYFILVQN WGGVPLKLTP TTSINNVNIP RNSVKEVYDQ ILKDMVEAEG LVKKISDIGF GGRVSKSAVR GILARVCLNM AGYPLNDVAK FKDAATWAAK VNEYGEHALN PDYSQVFINL CKDQYDIKES IFEAELYGSN SDAFREGGRI GNENGVKCSA STDLIPTVGF AYGFVSTTRK LYTSYEYNAT DASKRDLRRD WAIATYTLNA SGVKANIAAT NIYARNCAKW RREYEVVTPK NKNYTSTNFQ ILRYADVLLM LAEAENEVNN GPNATAVNAL NEVRRRGYGK LLAGATNPAN ADYPGAISLS KAAFLKVIQD ERARELCFEG LRKSDLIRWG IFVNTMQATA TEFTTYAAMT TTIYKNARDA AQRVTATHLL YPIPILEMSL NKAMVQNEGY
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