Gene Phep_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2274 
Symbol 
ID8253380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2642307 
End bp2643107 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content37% 
IMG OID644935923 
Productradical SAM domain protein 
Protein accessionYP_003092540 
Protein GI255532168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00122382 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTCAAAG GTATTTTCGG GAAATTTAAG TCAGATAACC AGCCTAAGTA TGGCTGGTTT 
GGTAATTATT TGTCCTGGGC AGATGTATTA AAAGAAGCAG ACGGGTACGA TTCGGGGATT
ATTTTAGAAA GAACCAAAAA TGCGCTGTTA AAAGTAAAAT CCGGTGAAGC TGTTTACGAG
CGTGATTCTG TAATTTTTGA TAAAAAAGAG TATCCATTTC CTCTTCTTAC TTTTTTACAG
CATAGTGCTT CTTTAAAGGG TGCTCCGCTT CATGTGATTG ATTTTGGAGG TTCATTGGGC
AGTACTTATT ACCAGATCAA AGAATTTTTG AATCCCGGCG TATGTTCAAC CTGGAATGTA
GTTGAGCAAG AGCATTATGT AGCATCCGGT AAGGCTAACT TTGAAGATGG TCAACTTAAA
TTCTATAACA GTATAGCGCA ATGTATCCAG GATAAAAACA TTGATTTTGT ATTGATTTCC
AGCTCTGTAC AGTATCTTGA AAGACCTCAT ATTTTTCTTA AAGAACTTGC CGCATATCAT
TTTGACTTTA TTCTTTTTGA CAGAACCGCT TTTCATGAGG AAAAAGAAGA CCGACTGACC
TTACAGATCG TTCCTCCTGA AGTTTATCCG GCCTCTTATC CTTCCTGGTT TTTCAATCAG
GAAAAACTAT TGAGCCATTT TGCTGAAGGT TACGATGTAA TTGCTGATTT CCCACCATAT
ATTGATGGTG AGCAGATTCT TTATATCGAT GAATACCCAT CCGGTTATAG TCGCGGATTT
TATTTATCTG CAAAAAAATA A
 
Protein sequence
MFKGIFGKFK SDNQPKYGWF GNYLSWADVL KEADGYDSGI ILERTKNALL KVKSGEAVYE 
RDSVIFDKKE YPFPLLTFLQ HSASLKGAPL HVIDFGGSLG STYYQIKEFL NPGVCSTWNV
VEQEHYVASG KANFEDGQLK FYNSIAQCIQ DKNIDFVLIS SSVQYLERPH IFLKELAAYH
FDFILFDRTA FHEEKEDRLT LQIVPPEVYP ASYPSWFFNQ EKLLSHFAEG YDVIADFPPY
IDGEQILYID EYPSGYSRGF YLSAKK