| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2205 |
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| Symbol | |
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| ID | 8253311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2537771 |
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| End bp | 2539741 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644935854 |
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| Product | cytochrome c class I |
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| Protein accession | YP_003092471 |
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| Protein GI | 255532099 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.170192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA CTTATAAAAT GCTGGCCATG CTGGCTTTGA GCTTCAGTTT TACAACAGCA
GGAGCCCAGG AAACACCAAA AGAAGAAGAT TTTTTTAAAA TAATGAAAGT AAGGGTACCG
GAAGGTACCA TATTGGAAGT AGGGGGACTG GTTACCCTGC CCAATGGCGA CCTGGGCATA
TCCACCCGCA GGGGCGATGT ATTCATAGTA GAAAACCCAA CCGGCAGCCA GCCTTATTTC
CGCAAATTCG CAACCGGTTT GCATGAAATC CTCGGGCTTG CCTATAAAGA CGGGGCTTTT
TATGTAGCCC AAAGGGGAGA ACTGACCAAA CTCATAGATA AAAATATGGA CGGCAAAGCC
GATGTATATG AAACCATTTA TGCCTGGCCC TTAAGCGGAC ACTACCATGA ATATAGCTTC
GGCCCCAAAA TAGCACCCGA TGGCTCTTTC TTCGTTACGG GCAATGTTGC CTTTGGCAGT
CAGGAATGGT GGCGTGCAGA AAGCAGGGTA CCCATGCGCG GATGGGCCAT GAACATCACC
GAAGACGGGA AAATGAGGCC CTGGGCTGCA GGTATGCGTT CTCCGGCAGG CTTAAATGTG
ATTGACGGAC AATTGTATTA TACAGAGAAC CAGGGCGACT GGGTAGGCTC CGGTGGTATC
TGGAAAGTAA ATGAAGGAGA TTTTATGGGC CATCCAGCCA GTCTGATCTG GACCAAAAGG
AACGATTCTC CTTTAAAGCT CTCTTCCGAA TTTTTCTACT CCAAAATGGA TGAAAGAAGG
ATAAAAGACG ACAATGGTAA ATACCTTAAA CCTGAGAACA GGGTAAACGA GAACTTTAAA
ACACTCTTCG ACATGAAGAA AGTTTTTCCT GATCTGCGTT TACCCGCAGT ATGGTTGCCT
TACGGCATCC TGGGCATATC CACATCCGAA CCGGTAAAAA TCCCTAAAGG AAATTTTGGT
CCCTTTGAAG GACAATTGTT AATTGGCGAC CAGGGCATGA GCATTATCTC AAGGGTCTTT
ATGGAAAAAG TTAACGGAGA AGAGCAGGGA GCAGCATTTC TGTTCAGGGC AGGCTTCCGT
TCCGGTGTGC TAAGAATGGC CTGGGACCAG GATGGCTCTT TGTTTGTTGG CGAGACCAAC
CGTGGCTGGG GCTCCGCTGG CGATGCCAAC GAAGGCCTCG AACGTCTGGT ATACAACAAC
AAAATACCTT TTGAAATGAA GGCCGTAAGG GCCATGCCCG ATGGTTTTGA AATAGAGTTC
ACCAGCCCGG TCGATCTGAA ATCAGCACAG GACATTGCCT CATACAACGT AGAAAGCTTT
ATCTACAAAT ACCAGCCGGT ATATGGTTCA CCACCTGTAA ATAAAGAAAC ATTAAAAATA
AAAGGCGTTA AAGTCTCGGC CGACGGTTTA AAGGCCCGGA TTGTGGTCAA CAACCTCCGC
CAGTACTATA TCCATACCAT TTATGTAAAC GGTATCCGCG AAAAGCAAAA CTTCTATTCT
GTGGTGCATC CTGTAGCATA CTATACCTTA AACAACATTC CTTCCGGAGA AAAACTGGCA
ATCAGTGAGC TCAGTACCAA AAATTCGGCA AATGATCCTG TAGCCAGTGT CGCACCTGCT
GCAAAGACAA AAAAAGGAAC TGCAGACAGC AAAGCAAAAC CCGAAACAGC CGCCAAAAAA
ACAGTTGAAA CAAAAGCTGT GGCCAGTGCC AAGACACCTA CCTATAATGA GGTAAAAGGC
CTGCTCGCCA GCTATACCTG TCTGGCCTGC CACAACCCTG TAAAAAAGCA GGTCGGACCA
GCCTTTGCTG ATGTGGCAAA ACGAAACTAT TCCAATGAAA AGATCCTGCA GCTCATCCAT
AACCCTAAGC CAGAGAACTG GCCGGGCTAT GCCACAGAAA TGCCGCCAAT GCCCCAGGTT
TCCAAAGCAG ACGGGCTAAA AATTGCAGCT TATATCAATT CATTAAAATA A
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| Protein sequence | MKRTYKMLAM LALSFSFTTA GAQETPKEED FFKIMKVRVP EGTILEVGGL VTLPNGDLGI
STRRGDVFIV ENPTGSQPYF RKFATGLHEI LGLAYKDGAF YVAQRGELTK LIDKNMDGKA
DVYETIYAWP LSGHYHEYSF GPKIAPDGSF FVTGNVAFGS QEWWRAESRV PMRGWAMNIT
EDGKMRPWAA GMRSPAGLNV IDGQLYYTEN QGDWVGSGGI WKVNEGDFMG HPASLIWTKR
NDSPLKLSSE FFYSKMDERR IKDDNGKYLK PENRVNENFK TLFDMKKVFP DLRLPAVWLP
YGILGISTSE PVKIPKGNFG PFEGQLLIGD QGMSIISRVF MEKVNGEEQG AAFLFRAGFR
SGVLRMAWDQ DGSLFVGETN RGWGSAGDAN EGLERLVYNN KIPFEMKAVR AMPDGFEIEF
TSPVDLKSAQ DIASYNVESF IYKYQPVYGS PPVNKETLKI KGVKVSADGL KARIVVNNLR
QYYIHTIYVN GIREKQNFYS VVHPVAYYTL NNIPSGEKLA ISELSTKNSA NDPVASVAPA
AKTKKGTADS KAKPETAAKK TVETKAVASA KTPTYNEVKG LLASYTCLAC HNPVKKQVGP
AFADVAKRNY SNEKILQLIH NPKPENWPGY ATEMPPMPQV SKADGLKIAA YINSLK
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