| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2194 |
|---|
| Symbol | |
|---|
| ID | 8253300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2525009 |
|---|
| End bp | 2525314 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644935843 |
|---|
| Product | RNP-1 like RNA-binding protein |
|---|
| Protein accession | YP_003092460 |
|---|
| Protein GI | 255532088 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAT TTATTACAGG CCTTCCTTTA GAAGTAGGGG AAGATGAATT AACAGCCGTA
TTTGGTGATT TCGGTCAAGT AAAATCACTT AGGATAATCA AAGATCGTGA GACTGGTCAA
AGTCGTGGTT TTGGTTTTGT GGAAATGCCT GTTGAAGAAG AGGCAAAAGA AGCAATCAAA
CGCATGAACG GCGGCGATTA CAACGGTAAC CGCATCAAAG TTGCTGAAGC ACAGGAAAAA
CCAAATACTG GTGGTGCTGC AGGTGGTGGC TTCAGACGCA ACAACCGTAC AGAAAAAAGC
TATTAA
|
|---|
| Protein sequence | MKIFITGLPL EVGEDELTAV FGDFGQVKSL RIIKDRETGQ SRGFGFVEMP VEEEAKEAIK
RMNGGDYNGN RIKVAEAQEK PNTGGAAGGG FRRNNRTEKS Y
|
|---|
| |