| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2192 |
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| Symbol | |
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| ID | 8253298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2521798 |
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| End bp | 2524182 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644935841 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_003092458 |
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| Protein GI | 255532086 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTAA AGGAACAAAA AACCATCCTT TTTACAGATG TATGCTGCCT GGCACTGCTG
CTGGTATTTC TGTTGTCGCT GCCTTCAAAG CTGTTCCGGT CGCCCAGCTC CTATGTGCTG
GAAGCTTCGA ACGGGGAATT GCTGAGTGCA GCTATTGCCA GGGACGGACA ATGGCGTTTT
CCGGTAGCGG ATAGTGTTCC GGAGAAGTTT GCACAATGTA TTGTCGCTTT TGAGGACAAG
CGTTTTTATC AGCATCCGGG GATCGATATT TTAGCGATGG GCAGGGCCAT GCGCCAGAAT
TTTAAGGCCC GTACTGTGGT AAGTGGAGGC AGTACGCTGA CTATGCAGGT GATCCGCCTG
TCGCGGCGGG AAAGCCGTAC CATAGGCCAG AAGCTGATTG AAATGGTGCT GGCCCTGAGA
CTGGAACTGG GACATTCTAA AAATGACATT TTAAAACTAT ATGCGGCCAA TGCACCCTTT
GGGAGCAATG TTGTAGGGCT GGAAGCGGCT TCATGGCGTT ACTTTGGGCG TGGGCCGGAG
GCTTTGTCAT GGGGTGAAAT GGCTACGCTG GCCGTATTGC CAAACAGCCC CGCGCTGGTC
CATCCCGGTA AAAATTCGGC CAGGCTCATC AAAAAACGGA ACGATCTGCT GGATAAGCTG
GCTGTATTGG GGACCATAGA CCAGGCTACG GCCAATTTAT CCAAGCTGGA GCCTATTCCT
GGTAAGCCAC AGGCCCTGCC GCAATATGCC CCTCACCTGC TGAACCGCTT TAAAAGCGAG
CAGGCATCCT TAAAAAATAA AGGAACAAGG ATCAGCTCTA CGCTGGATTA CGATTTGCAG
CTGAAGTTAA ACGCCCTGCT TAAGCGCTAC AACAACCGTT ACCGGGCCAA CGACATCAAT
AACATTGCTG CCCTGGTGCT GGATGTGAAA AAAGGTACCG TACTGAGTTA TGTGGGGAAT
ATCTATCAGC CTGAAAATAA GGAACTGGAA AGCCATGTGG ACATGATCAG GGCGGCAAGG
AGTCCGGGTA GCACCTTAAA ACCCCTGCTG TATGCCAGTA TGCTGAACGA TGGGTTCATT
TTACCGCGTA CCCTGATACC GGATGTTCCC ACCCAGATTG GGGGCTATTC GCCCCAGAAT
TACGATTTGG GTTATGACGG AGCTATTCCG GCCGACAGGG CCCTGAGCCG TTCCTTAAAT
ATCCCTGCGG TGAAAATGCT GCAGACCTAT AAATACCAGC GTTTTTACGA TAAGCTGAAA
AAACTGGGTT TCAGTACCTT GAACCGGCCG GCCGACCATT ATGGCCTTTC GCTGATCCTG
GGGGGCAGTG AGGTAACGAT GTGGGACCTG GCCAGGACAT ATATGGGCAT GGCCCGTACC
TTAAATCATT TTAACGATTA TAAAGGCCGG TATAACCCCC ATGATTACGA TGAACCGCTT
TATATAAATG CCAGGCGGGA TACGCGGTAT GATGGTGATG AAACGCAGGT AAACTCGGTG
TTCGACCATG GTTCGGTCTG GAATGCCTTT AATGCCATGG AAGAACTGAT GCGCCCTGGT
GAAGAAGGTT TGTGGGAACA GTTTTCGTCT TCGCAGCGGC TGGCCTGGAA AACCGGGACA
AGTTTTGGTT TCAGGGATGC CTGGGCGGTT GGGCTAAACC CGGATTATGT GGTGTGTGTA
TGGGTGGGCA ATGCCGATGG TGAAGGCCGC CCGGGCCTTA CAGGGATTGA TGCGGCAGCA
CCGGTACTGT TTGATATTTT TAAGCAGCTG CCGGCAGGAA AATGGTTCCG GACACCTAAA
AACAAATTAA AAAAGATGCG TGTATGCCGG CAAAGCGGTT ATAAGGCCGG CGAATATTGT
GGGGATGTAC TGGAAGAACT GGTTTCCCCG GCGGGAGAAA AAACAGTGCT TTGCCCCTAC
CATAAGCTGG TACACCTGGA CAGGACAGGT ACCTACAGGG TAACAGATGC CTGTGAAGCA
CCTGCTGAGA TGCAACACAG GGCCTGGTTT ATATTGCCAC CGGCAATGGA ATACTATTAT
AAGATCAAGA ACAGCGATTA TAAAGTGCTG CCCCCCTTTA AGCCGGGTTG CGGGGATGTG
GGCAGCAATT ATGTGATGGA GATGATCTAT CCGAAGAACA ATGCCAGCAT TTATGTGCCA
CTGGAGCTGG ATGGGAGCCG CGGTAAAGTG GTGCTGAATG CGACCCACCG GGATGCGGAC
ATAAAGATTT ACTGGCATAT AGACGGAGCA TATGTGGCCA CTACAAAAAA CTATCACCAG
CTGGCGGTGA GTCCGGCGCC CGGAAAACAT ACCCTGACCC TGGTAGATGA AAACGGGGAA
AGGCTGGTGC AGACTTTTAC CATTCTGGAT AAGGAGAAAA ACTAA
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| Protein sequence | MLLKEQKTIL FTDVCCLALL LVFLLSLPSK LFRSPSSYVL EASNGELLSA AIARDGQWRF
PVADSVPEKF AQCIVAFEDK RFYQHPGIDI LAMGRAMRQN FKARTVVSGG STLTMQVIRL
SRRESRTIGQ KLIEMVLALR LELGHSKNDI LKLYAANAPF GSNVVGLEAA SWRYFGRGPE
ALSWGEMATL AVLPNSPALV HPGKNSARLI KKRNDLLDKL AVLGTIDQAT ANLSKLEPIP
GKPQALPQYA PHLLNRFKSE QASLKNKGTR ISSTLDYDLQ LKLNALLKRY NNRYRANDIN
NIAALVLDVK KGTVLSYVGN IYQPENKELE SHVDMIRAAR SPGSTLKPLL YASMLNDGFI
LPRTLIPDVP TQIGGYSPQN YDLGYDGAIP ADRALSRSLN IPAVKMLQTY KYQRFYDKLK
KLGFSTLNRP ADHYGLSLIL GGSEVTMWDL ARTYMGMART LNHFNDYKGR YNPHDYDEPL
YINARRDTRY DGDETQVNSV FDHGSVWNAF NAMEELMRPG EEGLWEQFSS SQRLAWKTGT
SFGFRDAWAV GLNPDYVVCV WVGNADGEGR PGLTGIDAAA PVLFDIFKQL PAGKWFRTPK
NKLKKMRVCR QSGYKAGEYC GDVLEELVSP AGEKTVLCPY HKLVHLDRTG TYRVTDACEA
PAEMQHRAWF ILPPAMEYYY KIKNSDYKVL PPFKPGCGDV GSNYVMEMIY PKNNASIYVP
LELDGSRGKV VLNATHRDAD IKIYWHIDGA YVATTKNYHQ LAVSPAPGKH TLTLVDENGE
RLVQTFTILD KEKN
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