| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2114 |
|---|
| Symbol | |
|---|
| ID | 8253220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2439439 |
|---|
| End bp | 2440641 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644935763 |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003092380 |
|---|
| Protein GI | 255532008 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.673781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA TTATAACGAT ATCGCTTGAA AACGAAATGG ACCTGGTATT GGCTCATAAA
AAATCCATGA AAGCCGCCGA AAAACTCGGA CTTACCATCG CCACACAGAC CACTTTTGCG
ACCGCCGTAT CAGAAGTTGC CCGAACTGTC ATAGATTATA CCAACAACGG TTTGTTGAAC
ATTTATATAG ACGGCACCAT CCCCCGCTTC AACCTAATGG CCCAAATTAT CTTTAGCAGC
GAAGCCAGAT TAACCAAATC GGATGAAGGG TTTTACTACG CACAAAAACT TGTTCCAGAA
TTTGAAATGA GCACCTCCGG TACAGATCAT TTAATTACCA TGCGCATCGG TCTTCCCCGA
TTCCTCAAAC TTGATCAACT GAAAATCAAT TTACTCAAAG CATTTTTTGA AAAAGAAGAA
CCCATCAATG CCTATGAACA GATCAAACAC AAAAACAGTG TACTCCATAA AATCACCGGA
GAACAAGAAA TAGAAATCAA ACGGGAAAGA GAAATTAACG AAAAGAAAAA CGAATTCATC
TCCATTGCCA GTCACGAAAT CAAAACCCCT ATTACCGTCA TCAAAGCCTA TGCGCAAATG
CTCAAAATGA TGCGATCCGA ATGTAGCAAC AAAGCCAATG AAATCATAGA CAGGCTAAAC
GGGCAAACCA ATAAACTTAG CTATTTAGCC AATCAACTCA TGGACGTTTC CAAAGTTGAG
AACGGCAAAT TACAATACAA CTTTGAATCA ACTAAAATTA ATCAATTTGT AGGTGAGGTC
CTATCTGTAC TTAAACATGT TTATCCAGGA AATGAACTGG AGTGGAGCAA TTGTGAGGAA
ACTGAAGTCA ATCTCGACAA ACTGCGCATG GAGCAGGTAC TCACCAATCT GATCGGAAAT
GCATCCAAGT ATTCCGCACC AAACTCAGCC ATCAAAATTA CAGGCACTGT TGCCCAAGAA
CAGATCATAA TTGCTGTCAT TGATAAGGGA ATAGGCATGT CCGCAGAGAA TATGGAACGT
ATATTTGAGA AATTCTACCG GAACAAAGAA ATCACAGACA GCCACCCTGG ACTTGGGATG
GGGCTGTACA TCACCTCAAA AATCATCAAT GACCACGGCG GAAAGATTTG GGTTGAAAGT
GAACAAGGAA AAGGCTCAGC CTTCCATTTC ACAATTCCCC TGTTTACGCC AGCCAAAAAC
TAA
|
|---|
| Protein sequence | MTEIITISLE NEMDLVLAHK KSMKAAEKLG LTIATQTTFA TAVSEVARTV IDYTNNGLLN
IYIDGTIPRF NLMAQIIFSS EARLTKSDEG FYYAQKLVPE FEMSTSGTDH LITMRIGLPR
FLKLDQLKIN LLKAFFEKEE PINAYEQIKH KNSVLHKITG EQEIEIKRER EINEKKNEFI
SIASHEIKTP ITVIKAYAQM LKMMRSECSN KANEIIDRLN GQTNKLSYLA NQLMDVSKVE
NGKLQYNFES TKINQFVGEV LSVLKHVYPG NELEWSNCEE TEVNLDKLRM EQVLTNLIGN
ASKYSAPNSA IKITGTVAQE QIIIAVIDKG IGMSAENMER IFEKFYRNKE ITDSHPGLGM
GLYITSKIIN DHGGKIWVES EQGKGSAFHF TIPLFTPAKN
|
|---|
| |