Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2066 |
Symbol | |
ID | 8253170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2384044 |
End bp | 2385939 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644935714 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003092333 |
Protein GI | 255531961 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0885806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.200128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAG TTACGCTTCT TTTTTTCTTA TGTTTTATCC TTCAAATTGC CAGGGCCCAG ACTTCAACTG TAAAAAAAGC CCAGAACAGT TTTGATAAAG CCCAGGAGTA CCTCAGAAAC AACGATTACG ACCAGGCTAT CCCCCTGCTA CAGGAAGCCA TAAAGGCTGA TCCTGCTTTT CAGTTTGCTT TTATTCAGCT TGCCGATATC AACAGAAGAC AAAAATTATA CGAACAGGCC AAAATAAACT ATACCAGTGC CATTGCATTG GGCGGAATTC CGGATGCCCG GGCCTACTAT GGCTTTGCTG AGTCCCAGAT CTATACCGGC GATTATGCAA ATGCATTAAA CAACATTAAG CTTTTCATAG CGCAGTATAA AGGCAATGAT CCTGATTTCA TGAACAGGGC TAAAAAATAC CTGAGGGATT GTGAGTTTGC CATCGTAGCT TTAAAACAAC CCGTAAAATA CGATCCGATC AATATGGGAC CTGAAATCAA TTCGGTGCAC CGCGATTATT TTCCCTCGGT TACTGCCGAT GGGACAAGAC TTATATTTAG CCGGAACATC AATGGCAATG AGGATTTTTT TGTTTCAGAA AAAAAGGACA AATCATGGAG TACGCCACTT CCGTTAAGTG ACAAGATCAA TACCCAAAAG TACAATGAAG GCGCACAATC CATTTCCCCG GATGGGCTGT ACCTCTTTTT TACGGGCTGC AACCGTCCGG ATGGACTGGG GCGCTGCGAT ATTTACGTGA GCCATAAAAA TGGCAAAGAC TGGGGCGAGC CATTTAACCT GGGTGCACCG GTAAATACGT CCTATTGGGA ATCGCAGCCG GCAATCAGTC CGGATGGCAG CACCCTGTAT TTCGTAAGCA ACAGGCCCGG AGGCCTGGGG GGCTACGACA TCTGGAAAAG TATGCTAAAA GCAGACGGCT ACTGGTCGCA GCCCGAAAAT CTTGGCCCGG AGATCAATAC CCCCTATGAT GAGCACACAC CTTTTATACA CCCCGATGGC AAAACACTCT ACTTTTCATC AGATGGCTGG CCTGGTATGG GCAATAAGGA TATATTCATG AGCCGCATGA ATGAAGCAGG CAAATGGAGC AGTCCGGAAA ACCTGGGCTA CCCCATTAAT ACCTTTAATG AAGAAACCGG TTTGATTGTT ACTCCCGATG GCACTTACGG CCTGTTCTCT TCTAATTTAA AGGGTGGATA CGGAGATATG GACATTTACC AGTTTAAAAT GCCTGAAAAT AAAAAACCGC TTCCCATTAC TTATGTGAAA GGAATTGTGA CAGATAAGGA AAGCAAGGTA TTTCTGGAAG CTAAGGTCCA GGTGGTCAAC TTAAAAACAA AAAAAGTAGA TTACAGTGAT TATACTTCCA AAGAGACCGG TGATTTTCTG GCTGTAATGC CCCTGGGTGG AAATTATGCG TTTAACGTAA GTGCAGACGG TTATCTTTTT TATTCTGAAA ACTATCAGCT TGACAGTGCT TATATCAGCA AACCTTATGT TGTACAGGTT GCCCTGGAGA AGCTGAGCAC AGGAAAAAAC ATGGTATTAA AGAATATATT TTTCAATACC AATGAATACA CACTCTTACC GGCCTCCTTA ACAGAACTGA ATACCCTTCA GCAATTGCTT AAAAACAATG CAAGCCTTTG TATAGAGATA CAGGGGCATA CAGACAATGT AGGGAACGAC CAGCAGAATG AAAGGCTTTC TTTACAAAGG GCAAAAGCGG TTTACGACTA CCTGGTACAG GAAAAGATTG AGCCGCAGCG GCTAACCTTT AAAGGTTATG GAGAAAATAA GCCTATCGCA GCCAACGATA CCGATGCACA CCGCAGACAA AACAGGCGTA CTTCTTTCAT CATTACCAAA ATTTAA
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Protein sequence | MKKVTLLFFL CFILQIARAQ TSTVKKAQNS FDKAQEYLRN NDYDQAIPLL QEAIKADPAF QFAFIQLADI NRRQKLYEQA KINYTSAIAL GGIPDARAYY GFAESQIYTG DYANALNNIK LFIAQYKGND PDFMNRAKKY LRDCEFAIVA LKQPVKYDPI NMGPEINSVH RDYFPSVTAD GTRLIFSRNI NGNEDFFVSE KKDKSWSTPL PLSDKINTQK YNEGAQSISP DGLYLFFTGC NRPDGLGRCD IYVSHKNGKD WGEPFNLGAP VNTSYWESQP AISPDGSTLY FVSNRPGGLG GYDIWKSMLK ADGYWSQPEN LGPEINTPYD EHTPFIHPDG KTLYFSSDGW PGMGNKDIFM SRMNEAGKWS SPENLGYPIN TFNEETGLIV TPDGTYGLFS SNLKGGYGDM DIYQFKMPEN KKPLPITYVK GIVTDKESKV FLEAKVQVVN LKTKKVDYSD YTSKETGDFL AVMPLGGNYA FNVSADGYLF YSENYQLDSA YISKPYVVQV ALEKLSTGKN MVLKNIFFNT NEYTLLPASL TELNTLQQLL KNNASLCIEI QGHTDNVGND QQNERLSLQR AKAVYDYLVQ EKIEPQRLTF KGYGENKPIA ANDTDAHRRQ NRRTSFIITK I
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