Gene Phep_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2062 
Symbol 
ID8253166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2378831 
End bp2379922 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content42% 
IMG OID644935710 
ProductMannose-1-phosphate guanylyltransferase 
Protein accessionYP_003092329 
Protein GI255531957 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.106374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGA ACAATTACGC ATTGATCATG GCTGGTGGAG TTGGCAGCCG CTTCTGGCCT 
GTAAGCAGAA CTGAATATCC GAAACAGTTT ATAGATTTCT TTGGTGTAGG AAAAACATTG
ATTCAGAGTA CCTACGACAG GTTCTTAAAA ATCTGCCCTC CCGAAAACAT CTTTGTAGTG
ACCAACGAGA TCTATACGGA TATTATTAAG GAACAATTGC CGGGCCTGCA TGAAAACCAG
ATTCTTGCCG AACCTATCAT GCGAAATACT GCGCCTTGCA TTTCTTACGG TTCTATGAAA
ATTGCAAGCC TTAATCCGGA TGCAACCATC GTTGTGGCCC CTTCAGATCA TACCATCACC
AATCAGGAAG CCTTTATCGA AGCGATTGGG CAGTCTTTGA AGGCAGCCTC AGAGAACGAC
TGCCTGATTA CACTTGGCAT TAAACCCAGC CGGCCTGATA CCGGCTATGG CTATATACAG
TATATTGAAA ATACTTTAAA AACAGACAAT CAGATTCATA AGGTCAAGAT ATTTACAGAA
AAACCCAATC TTGAACTGGC TAAATCCTTT ATACAAAGTG GTGATTTTCT ATGGAACGCA
GGTATCTTTA TCTGGTCTGC CAGGTCTATA AATAAAGCCT TTTCCAGGCA CCTGCCTGAA
ATGCATGAGA TCTTTTTACA AGGTGGTCCG GTATACAATT CCGAAAACGA GAAAGATTTC
ATCAGTGATG CCTATCAGCA ATGCACCAAT ATCTCGATAG ATTTCGGTAT TATGGAAAAA
GCAGATAACG TGTACGTATT GCCCGCCGAT TTCGGTTGGT CTGACTTAGG CACCTGGGCT
TCTATTTACG ACATTGCCGA ACATGATTAT GTAGGAAATG CAGTAATCCC GGCAGAACAG
GTCATGATGT TCAATTCCTC AAACTGTATG GTTAATGTAC CTAAGGACAA GCTGGTCATA
TTACAGGGAC TGCACGATTA CATTGTGGTG GAATCCAACA ACACCCTGCT CATCTGTCCA
AGATCGGAAG AACAGACCAT CAAACAGGTA GTGGCAGATG TAAAAGCTAA ATTCGGCACA
AAGTTCATTT AA
 
Protein sequence
MNKNNYALIM AGGVGSRFWP VSRTEYPKQF IDFFGVGKTL IQSTYDRFLK ICPPENIFVV 
TNEIYTDIIK EQLPGLHENQ ILAEPIMRNT APCISYGSMK IASLNPDATI VVAPSDHTIT
NQEAFIEAIG QSLKAASEND CLITLGIKPS RPDTGYGYIQ YIENTLKTDN QIHKVKIFTE
KPNLELAKSF IQSGDFLWNA GIFIWSARSI NKAFSRHLPE MHEIFLQGGP VYNSENEKDF
ISDAYQQCTN ISIDFGIMEK ADNVYVLPAD FGWSDLGTWA SIYDIAEHDY VGNAVIPAEQ
VMMFNSSNCM VNVPKDKLVI LQGLHDYIVV ESNNTLLICP RSEEQTIKQV VADVKAKFGT
KFI