Gene Phep_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2056 
Symbol 
ID8253160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2372787 
End bp2373758 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content43% 
IMG OID644935704 
ProductElectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_003092323 
Protein GI255531951 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0300917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTT TAGTATATGT AGAGCAGGTA GATGGTAAAT TTAAGAAATC TGTATTCGAG 
GCAGTTTCTT ATGCAAAAGC CATTGCAGAT AAACAAAGCA GCAATTTAAC TGCGATTTCT
ATTGGTAACG TTGGCGACAG CGAACTTAAG GAACTGGGTA AATACGGTGC GTCAAAAGTA
TTGAACGTTT CCAATGAGCA GTTAAAAAAC TTTGTAAACC AGGCTTACGC CGCAGTGATT
GCAGAGGCAG CAAAAAAAGA AAATGCTGAT GTTATTATTT TATCTAATTC TTTCTCAGGC
AAAGGGTTAG CGCCAAGAAT TGCAGTAAAA CTTAATGCAG GACTGGTAGA CGGTGCTGTA
GAATTGCCAC AACTTGATGC CGGAAAATTC CAGGTTAAAA AAACAGCCTT CTCCGGAAAG
GCATTTGCCA TAACTGAACT CAGCTCTGCA GTTAAAGTAA TTGCCCTGAA CCCAAATGCT
TTTGGTGTGA AGGACAATGC GTCCGACATT AGCATAGAAG CTTTTAGTCC GGAACTAAAG
CCATCAGACC TTACTGCTAT TGTAAAAGAA GTAGTAAGGG CTACCAATAA AATATCCTTA
CCGGATGCGG AACTGGTTGT TTCTGCAGGG AGAGGTTTAA AGGGCCCGGA AAACTGGGGA
ATGATAGAAG AACTTGCTGC ACTGCTGGGT GCAGCTACAG CTTGTTCCAA GCCGGTGTCG
GATGCCGACT GGAGGCCACA TGCTGAACAC GTTGGCCAGA CAGGTATTGC CATCAGCCCG
AACCTGTATA TTGCCATTGG TATCTCTGGG GCGATCCAGC ACTTGGCGGG TGTAAGTTCA
TCAAAAGTAA TTGTGGTAAT CAATAAAGAC CCAGAAGCAC CTTTCTTTAA GGTGGCCGAC
TATGGTATTG TTGGCGACGC ATTTGAAGTT GTACCAAAAT TAATAGAAGC ATTAAAAGCA
CATAAAGGTT AA
 
Protein sequence
MSVLVYVEQV DGKFKKSVFE AVSYAKAIAD KQSSNLTAIS IGNVGDSELK ELGKYGASKV 
LNVSNEQLKN FVNQAYAAVI AEAAKKENAD VIILSNSFSG KGLAPRIAVK LNAGLVDGAV
ELPQLDAGKF QVKKTAFSGK AFAITELSSA VKVIALNPNA FGVKDNASDI SIEAFSPELK
PSDLTAIVKE VVRATNKISL PDAELVVSAG RGLKGPENWG MIEELAALLG AATACSKPVS
DADWRPHAEH VGQTGIAISP NLYIAIGISG AIQHLAGVSS SKVIVVINKD PEAPFFKVAD
YGIVGDAFEV VPKLIEALKA HKG