| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1967 |
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| Symbol | |
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| ID | 8253071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2269971 |
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| End bp | 2271647 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644935618 |
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| Product | hypothetical protein |
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| Protein accession | YP_003092237 |
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| Protein GI | 255531865 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.929106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000146847 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAATT TAAATTTTTA TGATGCGATT GTAATTGGGT CTGGTATCAG CGGGGGGTGG
GCAGCAATGG AATTATGTAA AAAGGGATTG AAAACGTTAC TTCTTGAACG TGGAAGAGAT
GTCAAACATA TACAAGATTA TCCCACAGCT AATTTGAACC CGTGGGATTT TGAGTTGGGC
TTTAATAATA CACTAAAAGA TCAGGAGAAT GATCCCATAC AAAGTATGGC ATATACTCCT
GCAGACAAGC ATTTTTATGT GAGTGATAAA GACCAGCCTT ATGTTCAGGA AAAGCCATTT
AATTGGTTTC GCGGCTATCA AGTAGGCGGC AGGTCGTTAC TATGGGGGCG CCAATGTTAT
CGTCTTAGCG ATTTAGATTT TGAGGCAAAT TTGAAAGAAG GCGTAGCCAT AGATTGGCCA
ATAAGATACA AAGACATTGC CAGCTGGTAT AGTTACGTGG AATCATTTAT CGGCGTTAGC
GGAAAACATG AAAATCTATC ACAGTTGCCC GATGGAGAGT TTTTGCCGCC ATTCGAATTG
AATTGCATAG AGGAACATTT AGCTGATTCT ATCCTCAAAA CTGAAGAAAA CAGGTTACTT
ACCCCAGCGC GCGTAGCCAA CCTAACGAAA GGCTGGGATA ATAGAGGACC ATGCCAAAAT
AGAAATCTTT GTACCAGGGG CTGTCCATTT GGTGGTTATT TTAGCAGTAA CAGTTCTACA
ATCCCTTCTG CAATGGCTAC AGGTAATTTA ACATTGAGGC CTTTTTCAAT CGTTGTTGAG
TTAATATATG ATGAACAAGA ACAGAAAGCA AAAGGAGTTA AAGTAATTGA TAGCGTAAGT
AATGAAGTTC ACCTATTTTA TGCAAACATC ATCTTTATCA ATGCATCTAC TATACCAACT
ACAGCATTAT TACTTAACTC CGTTTCCTCA AGGTTTCCAA ATGGGTTTGG AAATGATAGT
GGCCAGGTAG GACATAACCT AATGGATCAT CATTCTTCTG CGGGAGCATT TGGAATGCAT
GATAGTTTTA AAAATCAGTA TTATAAAGGT AGACGGCCTT GTGGATTTTT AATTCCAAGA
TATAGAAACC TGAATAATAA TGAAAATCTT GGTTTTAGCA GAGGGTACAA CATCCAGGGT
CGGGGCCAGC GTCAGGAGTG GGTAGATCTT TCTTCTTCAA ATGGATATGG AAGTCAGTTT
AAAAAAGAAA TCACAACACC TGGTAAGTGG ATGGTATGGA TGGCCGGATG GGGAGAGTGT
TTGCCATATT TTGAAAATCG AGTCAGTCTA GTTCCCGATA AAGTAGATAA ATGGGGGCAA
AAGTTAATAG CTATTGATTT TGAATTTAAG GATAATGAAA GAAAAATGAT GGATGATATC
AAAGACACGG CTACTGAAAT GCTTATAAAA GCTGGTTTTA ATAATATTGA TAGTTTTAAT
TACAATAAAC CAGGAGGTTC CACTGTACAT GAAATGGGCA CGGCAAGAAT GGGGAACGAT
CCAAAAACGT CGGTATTGAA TAGATTTAAC CAAATGCATT CTGTAAAAAA TGTTTTTATA
ACTGATGGAA GCTGTATGAC CTCTTCGGGA TGTCAAAATC CTTCATTAAC TTATATGGCT
TTAACTGCCA GAGCTTGCGA TTACGCTGTT AAGCAATTAA AGCTGGGTAA TCTTTGA
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| Protein sequence | MKNLNFYDAI VIGSGISGGW AAMELCKKGL KTLLLERGRD VKHIQDYPTA NLNPWDFELG
FNNTLKDQEN DPIQSMAYTP ADKHFYVSDK DQPYVQEKPF NWFRGYQVGG RSLLWGRQCY
RLSDLDFEAN LKEGVAIDWP IRYKDIASWY SYVESFIGVS GKHENLSQLP DGEFLPPFEL
NCIEEHLADS ILKTEENRLL TPARVANLTK GWDNRGPCQN RNLCTRGCPF GGYFSSNSST
IPSAMATGNL TLRPFSIVVE LIYDEQEQKA KGVKVIDSVS NEVHLFYANI IFINASTIPT
TALLLNSVSS RFPNGFGNDS GQVGHNLMDH HSSAGAFGMH DSFKNQYYKG RRPCGFLIPR
YRNLNNNENL GFSRGYNIQG RGQRQEWVDL SSSNGYGSQF KKEITTPGKW MVWMAGWGEC
LPYFENRVSL VPDKVDKWGQ KLIAIDFEFK DNERKMMDDI KDTATEMLIK AGFNNIDSFN
YNKPGGSTVH EMGTARMGND PKTSVLNRFN QMHSVKNVFI TDGSCMTSSG CQNPSLTYMA
LTARACDYAV KQLKLGNL
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