Gene Phep_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1939 
Symbol 
ID8253043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2239820 
End bp2240374 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content38% 
IMG OID644935590 
Productstress protein 
Protein accessionYP_003092209 
Protein GI255531837 
COG category[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0105651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTA ACTTACAAAA AGGGCAGAGA GAAAATATAG ATGCGCCCAA ATTTACCATT 
GGTTTGGGTT GGGATACAAA CAGTTCATCT ACAGGTACCG CCTTTGACTT AGATGCTTCT
GTTTTTATGC TGAATGACAA TAAGAAGCTG GTTTCTGATG AACATTTGGT CTTTTATAAT
AACCTGAAAT CGCCGGATAC AGCTGTAGAA CATACTGGTG ATAATTTAAC CGGCGATGGG
GATGGAGATG ACGAGCAGAT TAAGGTTGAT CTAACAAAAG TTGGCGGAAG CGTTTCAGAA
ATTTGTGTGG TAGTAACTAT TCATGAAGCG GAAAGCAGAA GGCAAAATTT TGGACAGGTT
AGAAATTCGT ATGTACGTAT TTTTGATGCG GTTACCAATG AAGTTTTGCT GAAGTATGAA
TTGGAAGAAG ATTTTTCTAT TGAGACTGCA GTTGAATTTG GCAGAATATA TAAACGCGAC
GGTAAATGGA AATTTGAGGC TGTAGGAATG GGAATGAAAG GCGGCTTACA GGATTATTTA
AATAAATATC AATAA
 
Protein sequence
MAINLQKGQR ENIDAPKFTI GLGWDTNSSS TGTAFDLDAS VFMLNDNKKL VSDEHLVFYN 
NLKSPDTAVE HTGDNLTGDG DGDDEQIKVD LTKVGGSVSE ICVVVTIHEA ESRRQNFGQV
RNSYVRIFDA VTNEVLLKYE LEEDFSIETA VEFGRIYKRD GKWKFEAVGM GMKGGLQDYL
NKYQ