Gene Phep_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1915 
Symbol 
ID8253019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2213341 
End bp2215788 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content45% 
IMG OID644935566 
Productglycosyl transferase family 51 
Protein accessionYP_003092185 
Protein GI255531813 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.70734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAG AAATTCGCAA TAAGTACATT CGTTATTCAA GCATATTCCT TTTTTGTATC 
ATCACCTTCT TTTGTGCCCT GCAGCTCAAT TTCTTATGGT TATTCGGTTA TTCCCCTTCT
TATGAGGACA TTAAGACCCC AACCCTCAGA GTGGGCTCAG AACTCTACAC TTCCGATGGA
AAATTGATTG GCCGTTATTA TAAAGAAAAC CGCACCCCGG TTAGCTTTAA TGAAATATCG
CCCAGCGTTA TCAATGCATT GGTAGCCACC GAAGACGTCC GTTTCTATAA ACACATGGGT
ATTGATTTCC GTTCTCTCCT TTCCAGCGGC ATCTCTACCG CAACAGGCGA TAAACGCGGG
GCCAGCACCA TTACCCAGCA GCTGGCAAAA AACCTCTACA GAACACGTTA CAATAAGTCA
CAAGGCCTGT TAAGCCATGT TCCCCTGCTC CGCACGCTTG TGGCAAAACT CAAGGAATGG
CTTACAGCCG TAAAACTGGA GTCCAACTAC TCCAAAAACG ACATCATTAC CATGTACCTC
AATACGGTAT CTTTTGGAAA TAATGCCTAT GGCATTAAAA CTGCATCCCG CATCTATTTT
GATAAGGAGG CCAGTGCACT TGAAGTGCCG GAATCGGCCC TATTGGTGGG TATGCTCAAA
GGAACAACCA CCTATAACCC CATAAGAAAC CCTCAAAAAG CACTGGAACG CCGCAACGTA
GCACTGGCGC AGATGAACAA ATACAACTAT ATTTCTGCTG CTGACCTGGC TACCTATAAA
AATACCCCCA TAAAACTCAA AGAAGGCCGG ATTGATGAAG GAAGTGACGG CGACTCTTAT
TTAAGGGCGG CGGTAGACAA GTACCTGGAA AAATGGTGCA AGGACAATGG TTATGATCTG
TATGAAGACG GATTGAAAAT TTACACCACC ATAGATTCAA AACTTCAGAA ATATGCAGAA
GAAGCTGTTG CCGATCAAAT GAAAATCATA CAACGCAGGT TTTACAGCGT CTGGGGAAAT
CAGGATCCAT GGGAAGATTC TGAAGGGAAA AAAGTCGACT ACCCGGATCG CGCCATGCGC
AACCTCCATA TCTTTAAATT ACTGGAAAAA AAATATCCAA ACAGCCCCGA TTCCATAACA
GCTTATTTCA ACAGGAAGAA GAAGATGAAG ATCTTTACCT GGAAAGGCGA TCGCGACACC
TTATTCTCTA CCATGGATTC TATCCGTTAT TATGGCAAAA TCATGAATAC CGGCATGATG
ACCCTGGATC CTTTTAATGG CAAGATCAGG GTATGGGTTG GTGGTCTCGA CCACAAGTAT
TTTAAGTACG ACCACGTTAA CCAGGCCAAA AGGCAGGCAG GCTCTACCTT TAAACCTTTT
GCCTATCTGG CTGCACTGGA AAGCGGGATG AGCCCCTGCG ATAAGTTTAC CGACAAACCG
GTAAGGATTG CCTACCAGGA AAACGGAAAA ACTGAATACT GGGAACCTAA AAATGCCGAC
TGGAGCAATA GCTACCGAGA AATGTCGCTC CGCTGGGCCA TGGCCAAATC TGTCAATACC
ATCACCGCCC AGGTTACCGA AAAAGTGGGC TGGGACAATG TGGTCAAATG GGCACATGAA
TGCGGCATCG ACAGTCACCT CGAATCTGTT CCTTCCGTAA GTCTGGGCCC CAACGACGTA
TCTGTTTTTG AAATGGTAAA AGCTTACGGT ACTTTTTTAA ACGGAGGACT AAAAACAGAC
CCGATCCTTG TGGAAAAGAT AACCGACCTG GACGACAACC TGATAGAAGA GTTTAAAGCC
AAAACAAAAA GGGTCCTTAC CGAAGAAATA TCCTGGCTCA TGCTCTACAT GTTCAGGGGT
GGTATGGATG AGCCCGGTGG TACTTCGCAA GCCCTCTGGG AATGGGACCT TTGGAAGAAA
AACAATCAGA TAGGTGGCAA AACTGGTACA TCAAGCGATT ATGTGGACGC CTGGTACATG
GGCATCACCA AAGATCTGGT AACCGGCGTT TGGGTAGGTT GCGATGAACG TACCGCACAC
TTTAAAAACG GCGAAACGGG TGAAGGCTCC AGAACTGCCC TTCCCATCTT TGCCAAATTT
ATGGAAAAGG TATATAAAGA TCCAAGTACG GGCTATACCA TGGGTCCTTT CCCTAAAGCT
ACTGTTAAAA TTACCAGGGA AATCAATTGC CCTACGCCAA GATATGAGGT GGATACCACA
TCCAACGACA GTCTGGAGGT AGACTCGACC AATTTTGAAG TGCCCGCAAC AGAAGAGCCG
AAACCTGTTC AAAACGAGCC TGTAGTCCAA AAAACTGAAG AAAAGAAAAC ACCTGAGCCT
GTTAAACAAC CTGCCCTCGA AGTGCCGCTT ACCAGGAAGG AAGAAAGGGA ACTCAGAAAA
AAACAACGCC AGGAAGAAAG AGAAAAAAAG AAAAACGGCA ATCAGTAA
 
Protein sequence
MFKEIRNKYI RYSSIFLFCI ITFFCALQLN FLWLFGYSPS YEDIKTPTLR VGSELYTSDG 
KLIGRYYKEN RTPVSFNEIS PSVINALVAT EDVRFYKHMG IDFRSLLSSG ISTATGDKRG
ASTITQQLAK NLYRTRYNKS QGLLSHVPLL RTLVAKLKEW LTAVKLESNY SKNDIITMYL
NTVSFGNNAY GIKTASRIYF DKEASALEVP ESALLVGMLK GTTTYNPIRN PQKALERRNV
ALAQMNKYNY ISAADLATYK NTPIKLKEGR IDEGSDGDSY LRAAVDKYLE KWCKDNGYDL
YEDGLKIYTT IDSKLQKYAE EAVADQMKII QRRFYSVWGN QDPWEDSEGK KVDYPDRAMR
NLHIFKLLEK KYPNSPDSIT AYFNRKKKMK IFTWKGDRDT LFSTMDSIRY YGKIMNTGMM
TLDPFNGKIR VWVGGLDHKY FKYDHVNQAK RQAGSTFKPF AYLAALESGM SPCDKFTDKP
VRIAYQENGK TEYWEPKNAD WSNSYREMSL RWAMAKSVNT ITAQVTEKVG WDNVVKWAHE
CGIDSHLESV PSVSLGPNDV SVFEMVKAYG TFLNGGLKTD PILVEKITDL DDNLIEEFKA
KTKRVLTEEI SWLMLYMFRG GMDEPGGTSQ ALWEWDLWKK NNQIGGKTGT SSDYVDAWYM
GITKDLVTGV WVGCDERTAH FKNGETGEGS RTALPIFAKF MEKVYKDPST GYTMGPFPKA
TVKITREINC PTPRYEVDTT SNDSLEVDST NFEVPATEEP KPVQNEPVVQ KTEEKKTPEP
VKQPALEVPL TRKEERELRK KQRQEEREKK KNGNQ