| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1884 |
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| Symbol | |
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| ID | 8252988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2177491 |
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| End bp | 2178015 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935535 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003092154 |
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| Protein GI | 255531782 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.715704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATCA GTAGTTTATT ATCCGGAAAA AACAGATACA GCATGCTGCT GCTGCTATTG
GTTGCATTAT TTTTTTCTGC CTGTAGTTCA AGACGGAATA CGGTGAAGCC TGGCAGTACG
GCTGCGGCCA AAGCTGCAGA CGCCATGTCG CATTTAAAGA ACAGGAGCCT GTATAAGTTT
ATAACCGATT GGACAGGTGT TCAGTATAGG TTGGGGGGAC TGGATAAAAG GGGGGTCGAC
TGTTCCGGCT TTGCTTTATT GCTGCAAAAA GATATTTATG GCAATACCTT GCCCAGAAGG
TCCAGGGACC AGGCTGATGC CGTGAAAGAA AAGAGTATGG GCCAGCTGAA TGAGGGCGAT
CTGATCTTTT TTTCTTTCGG AGGCGGCGCA GTAGACCATG TTGGGGTTTA CCTGAACAAC
AATTATTTTG TGCATGCCTC TACTACCAGG GGCGTTGTGG TCGACGATTT AAGTCTGCCT
GCCTACCAAA GGGCTATTGT TAAGGCTGGA TCTTTAAAAA ACTAA
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| Protein sequence | MNISSLLSGK NRYSMLLLLL VALFFSACSS RRNTVKPGST AAAKAADAMS HLKNRSLYKF
ITDWTGVQYR LGGLDKRGVD CSGFALLLQK DIYGNTLPRR SRDQADAVKE KSMGQLNEGD
LIFFSFGGGA VDHVGVYLNN NYFVHASTTR GVVVDDLSLP AYQRAIVKAG SLKN
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