Gene Phep_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1859 
Symbol 
ID8252963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2150806 
End bp2152050 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content44% 
IMG OID644935510 
Producthypothetical protein 
Protein accessionYP_003092129 
Protein GI255531757 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.958241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAA TTAAGCCATT TTGTGCGCTT AAACCCGCTG CTCATTTGCA ACAGCAAGTG 
GTCACGCGGC CGCTTGAAAA TTACAGTACG GGTGAGGCAA AGCTGATTGC TTCGGAAAAT
CCATGCAGTT TTCTGCATTT AATTGATCCG GAACTGGACA ATCCTTATCT GAGGGGTACC
AGACAGGAAC TGGTGTTTAA AAAGATCAGT GAAAACCTGG AAAGTTTTAT AGAACACCGC
TATTTGGTTA AACAACCACA ACCCGCCATT TACATTTACC AGGTACGCCA CGATGAGCTG
GTGCAAACAG GGATCTGGAC CCTTACACAC ATCAGCGATT ATCTGGAAGG CAGGATCAAG
AAACATGAGT CTACCGTAGA ACGCAGGGAG AAGCTTTTGG CCGATTATCT GCAGCAAACA
GGGCTGGATG CTAACCCGGT ACTGATTACT TACCAGCCAG ATGCATTGGT AGACCGGCTG
ACGGAAAAAT ACCTGTTACA AAATCCTGAC CTGGATTTTG TTTTTGAAGA TGGTACGGTA
CACCGGGTGT GGGCCATTAC TGATATAGCC GATTTAACAA CCATTGTACA CTCATTTGCA
CAAATGCCTG CAGTTTACAT TGCAGATGGC CATCATAGGG CTGCTTCTAT GGCAAAGATG
GGTATGCAAA AAAAAATCCT GAACGGTACA AAACACGAGG GAACTGAACT TTACAATTAT
TTCAGTACGG TATACATGAA CACCCAGGAG GTAAAAGTAC TTGAATTTAA CCGGCTGATC
AGGGATATGG GAGGGCTGAA AGCCGAACAC TTTCTAAAGA CTGTTGCCCA GTCATTTTTA
ATGGAAAAAT CTGCAGTTGC GGTGAAACCG GGGGCATTGC ACCAAATAGG TATGTATTTT
AACGGACAAT GGTATACACT ACATCCAAAA ACGGGTTTGT ACGATAAATA TGATCCTGTT
GCCGTATTGG ATGTGAGCAT TTTGCAGAAT TTTATTCTTG GACCTATACT AAACATACAG
GATCCCAGAA CTGATGCCCG GATTACTTTT GAAGGAGGTA GAACGCCGGT CTTTACGCTG
CAGACCCGTG TAGATAACGG CTTGTTTGCT ATAGCTTTTA CCTTGTATCC CCCTTCTGTT
GAACAAGTGA TTGCTGTAGC AGATGCAGCA GGGGTGATGC CCCCTAAGTC GACCTGGGTA
GAACCCAAAT TTCTGGTGGG GTTACTGACG AGCTATTTCA ATTAA
 
Protein sequence
MPEIKPFCAL KPAAHLQQQV VTRPLENYST GEAKLIASEN PCSFLHLIDP ELDNPYLRGT 
RQELVFKKIS ENLESFIEHR YLVKQPQPAI YIYQVRHDEL VQTGIWTLTH ISDYLEGRIK
KHESTVERRE KLLADYLQQT GLDANPVLIT YQPDALVDRL TEKYLLQNPD LDFVFEDGTV
HRVWAITDIA DLTTIVHSFA QMPAVYIADG HHRAASMAKM GMQKKILNGT KHEGTELYNY
FSTVYMNTQE VKVLEFNRLI RDMGGLKAEH FLKTVAQSFL MEKSAVAVKP GALHQIGMYF
NGQWYTLHPK TGLYDKYDPV AVLDVSILQN FILGPILNIQ DPRTDARITF EGGRTPVFTL
QTRVDNGLFA IAFTLYPPSV EQVIAVADAA GVMPPKSTWV EPKFLVGLLT SYFN