Gene Phep_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1817 
Symbol 
ID8252920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2116228 
End bp2116590 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content43% 
IMG OID644935468 
Producthypothetical protein 
Protein accessionYP_003092088 
Protein GI255531716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0179711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000587456 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCATCA GGAACATGGA CTTTAGCTAT GCCACACCCG ATATGCAAAT AGTTTTGAAG 
CTGCAGGCCT TAATTGACAT GCATTTTAAG CGTCAAAAAC AGGGCGATTA TTATGCGGAT
GTACTTGGAG AAAATGTATT TAGGCTGAAC CGCCTGGCTT TTGATTACCT GGGCAAAACG
GTTTATGAAC TGATCTATGA CCGGGTGCTT GAGGAAGTGG AAAGGATGAT GCTGGGTAAT
GTGGTATCAT CGATGCAGGA AATGGCGGAG GATTTGGGTT TTTCTGGCCC GGATTACCTG
TTTAGCTATA TCAATAAAGT TTCGGTTAGG TTATGTTCGA CATCAACGTT AGCCAAAAGC
TGA
 
Protein sequence
MSIRNMDFSY ATPDMQIVLK LQALIDMHFK RQKQGDYYAD VLGENVFRLN RLAFDYLGKT 
VYELIYDRVL EEVERMMLGN VVSSMQEMAE DLGFSGPDYL FSYINKVSVR LCSTSTLAKS